DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and Doc2

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster


Alignment Length:473 Identity:262/473 - (55%)
Similarity:311/473 - (65%) Gaps:92/473 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSMQELMDMRMQQQLAHEIYRQQIMQRIPDPFPSMLPFNMPHQQPHMMLPSRPTLPGVEAKLEN 65
            |::|.||:|:||||.:||||||||||||||||||.|||..||.   |:::|.|.||||||..|:|
  Fly     1 MITMNELVDLRMQQHIAHEIYRQQIMQRIPDPFPPMLPIPMPR---HVIMPPRVTLPGVEMTLQN 62

  Fly    66 NDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAG 130
            :|||:|||:|||||||||||||||||||:|:||||:|::||||||||||||||||||||||||||
  Fly    63 DDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWVPAG 127

  Fly   131 GAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSE 195
            ||||||||||||||||||||||||:|.:|||||||||||||:|||||||||||||||||:||:::
  Fly   128 GAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTAD 192

  Fly   196 LTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKLNSS------ 254
            |.|:||||||||||.|||||||||||||||||||||||||||||||:||||||||::||      
  Fly   193 LAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSSSPTGEDQ 257

  Fly   255 ------GNSTLESEDD-------------GSSVSSCDSPQAKRQRQD---------FEQDST--- 288
                  .:|..:||.|             .||:...|.||.||.|.:         .:..|.   
  Fly   258 DQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGA 322

  Fly   289 -----GSVSPAYYGATHPVANPM------SPYLRHHLSYGPSGAAGLPPS---IAAAYFG----- 334
                 ||..|..:..:||  :|:      |.:::|   :..:..:.|.||   :|..|||     
  Fly   323 SSLALGSPPPHLHSHSHP--HPLQARSASSVFMQH---FQQNMQSLLRPSLVDLACTYFGRPHEY 382

  Fly   335 GVPPQILPM-PPA-------------TYAPTVAPVSPVASQ--------PVGSSTPT------TS 371
            |...|..|| |||             ...|.|:....::.:        .|||.|.|      ..
  Fly   383 GGAIQASPMYPPAAMLQAGLGPHPGLNLPPGVSGADLISDESGAEELELDVGSETSTLEQSTQEQ 447

  Fly   372 PRPSTSTKRNSFSISAIL 389
            |....||:...|||||||
  Fly   448 PLEQPSTRSKGFSISAIL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 163/186 (88%)
Doc2NP_648282.1 TBOX 55..242 CDD:238106 163/186 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450222
Domainoid 1 1.000 324 1.000 Domainoid score I3229
eggNOG 1 0.900 - - E1_KOG3585
Homologene 1 1.000 - - H138204
Inparanoid 1 1.050 254 1.000 Inparanoid score I3166
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - otm43723
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4271
109.890

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