DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and Doc3

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster


Alignment Length:442 Identity:259/442 - (58%)
Similarity:298/442 - (67%) Gaps:77/442 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSMQELMDMRMQQQLAHEIYRQQIMQRIPDPFPSMLPFNMPHQQPHMMLPSRPTLPG-VEAKLE 64
            ||::..:.|:|:|||:|.||||||||||:|||...:||....|..|... |.:||||| ||||||
  Fly     1 MLTLPNIADLRLQQQIAQEIYRQQIMQRLPDPLCGLLPNFAGHFMPPPP-PPQPTLPGDVEAKLE 64

  Fly    65 NNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPA 129
            ||:||||||.|||||||||.|||||||||||||||||||||||||||||||||||||||||||||
  Fly    65 NNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPA 129

  Fly   130 GGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSS 194
            |||||||||||||||:|||||.|||||||||:||||||||||::||||||||||||||||:||:|
  Fly   130 GGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKYQPRLHVIRTS 194

  Fly   195 ELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKLNSSGNSTL 259
            :|.|:||||||||:||||||:|||||||||||||||||||||||||||||||||||:|.|...| 
  Fly   195 DLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSPPPT- 258

  Fly   260 ESEDDGSSVSSCDSPQAKRQR--QDFEQDSTGSVSPAYYGATHPVANPMSPYLRHHL-------S 315
            :.|.:....|...||.|||.|  ::|.|..       ::.:.|.|     |..||:|       .
  Fly   259 QPEANQVDRSPVTSPLAKRLRLVEEFPQHH-------HHQSHHSV-----PMQRHYLLDALEANF 311

  Fly   316 YGPSGAAGLPPSIA-AAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGSST------------ 367
            |.|   |..||:|. |.:.||..|.....||       :|.|.|:|...||::            
  Fly   312 YVP---APPPPAIEYARHIGGAYPSWAYTPP-------SPASSVSSSSAGSTSGESAADREADAD 366

  Fly   368 ----------------PTTSPRPSTST--------------KRNSFSISAIL 389
                            |.:.|.|:|:|              ||:|||||.||
  Fly   367 ADTFVDVVGTAPAAPPPPSPPVPATATAPASSSSDPTMAKPKRSSFSISDIL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 171/187 (91%)
Doc3NP_648280.1 TBOX 58..245 CDD:238106 170/186 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450221
Domainoid 1 1.000 324 1.000 Domainoid score I3229
eggNOG 1 0.900 - - E1_KOG3585
Homologene 1 1.000 - - H138204
Inparanoid 1 1.050 254 1.000 Inparanoid score I3166
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - otm43723
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4271
109.890

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