DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and Tbx1

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_006248681.1 Gene:Tbx1 / 360737 RGDID:1307734 Length:530 Species:Rattus norvegicus


Alignment Length:353 Identity:141/353 - (39%)
Similarity:189/353 - (53%) Gaps:54/353 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PTLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCR 118
            |.:..|..:||...||.:|:::|||||:||:||||||:.:|.|.|::..|.|.:|::.||:.|.|
  Rat   145 PKVASVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKR 209

  Fly   119 YK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASM 181
            |:  |..|.|:.||.|:|.:|.|::.||||||.||.|..|.:.|:|:|||||.||.:|||:|.||
  Rat   210 YRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSM 274

  Fly   182 HKYQPRLHII-----RSSELTQLPWAPQ--QAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGF 239
            |:||||.|::     :.||    .:|.:  :.|||.||.|.|||||||.|||:|||.:|||||||
  Rat   275 HRYQPRFHVVYVDPRKDSE----KYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGF 335

  Fly   240 RESGQSRCKRKLNSSGNSTLES--EDDGSSVSSCDSP-----QAKRQRQDFEQDSTGSVSPAYYG 297
            |:.......|. :..|...|.|  ....:.|:|...|     .....|::|::||    .||..|
  Rat   336 RDCDPEDWPRN-HRPGALPLVSAFARSRNPVASPTQPNGADKDVAEARREFDRDS----GPAALG 395

  Fly   298 -ATHP---VANPMSPYLRHHLSYGPSGAAGLPPSIAAAYFGG-----VPPQI---LPMP----PA 346
             ||||   :|..:||.|.     ||.|...||        ||     .||..   |..|    |.
  Rat   396 DATHPPQLLARVLSPALP-----GPGGLVPLP--------GGSGGRHSPPHADLRLEAPGASEPL 447

  Fly   347 TYAPTVAPVSPVASQPVGSSTPTTSPRP 374
            .:.|...|.:.........|.|...|.|
  Rat   448 HHHPYKYPAAAYDHYLGAKSRPAPYPLP 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 100/195 (51%)
Tbx1XP_006248681.1 TBOX 150..339 CDD:238106 100/192 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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