DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx16

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_571133.1 Gene:tbx16 / 30264 ZFINID:ZDB-GENE-990615-5 Length:470 Species:Danio rerio


Alignment Length:411 Identity:157/411 - (38%)
Similarity:208/411 - (50%) Gaps:92/411 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 MQRIPDPFPSMLPFNMPHQQPHMMLPSRPTLPG---------VEAKLENNDLWQQFHKIGTEMII 81
            ||.|.|         :.|   :..||..|::||         :...||:.:||:.||:|||||||
Zfish     1 MQAIRD---------LKH---NFSLPPPPSMPGAGDSYHQGNIRMTLEDPELWRSFHEIGTEMII 53

  Fly    82 TKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDS 146
            ||.||||||..::|||||...|.|.:|::|||....|||::..:|..||.||||.|.|.||||||
Zfish    54 TKPGRRMFPHCKISLSGLVPYAKYILLVDMVPEDGLRYKWNKDKWEVAGKAEPQPPYRTYLHPDS 118

  Fly   147 PATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQAFVFPE 211
            ||.|:||..|.:.|.|:|||||.||..|||:|.|||:|.||.||:::.:|..:.|:..|.|.|||
Zfish   119 PAPGSHWMKQPVSFLKLKLTNNALDQHGHIILHSMHRYHPRFHIVQADDLYSVRWSVFQTFTFPE 183

  Fly   212 TEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKLNSS-------GNSTLESEDDGS--- 266
            |.|.|||||||.:|||||||:||||||||:.| :..||:.|.:       .....:..:.||   
Zfish   184 TSFTAVTAYQNTKITKLKIDHNPFAKGFRDEG-TNSKRRANRNLPDPERVAKKMSKDSEHGSPQD 247

  Fly   267 -SVSSC---DSPQAKRQRQDF------------EQDSTGSVSP-AYYGATH----------PVAN 304
             ..|||   |...|.|:..:.            ::||..::.| :..|:.|          |..|
Zfish   248 VQPSSCEALDDEHAGRKELEVKAERYSPWGGACDRDSGHALRPESPLGSDHRDVYSSEQLVPGQN 312

  Fly   305 PMSPYLRHHLSYGPS-------------GAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVS 356
            ...||..|.....||             |:||.|         ....::|.:       ...|.:
Zfish   313 TYQPYRFHEYGKSPSPSSSSSVGGSSACGSAGRP---------SFESRVLDV-------ATVPDT 361

  Fly   357 PVASQPVGSSTPTTS--PRPS 375
            ..:|:|  ||.|..|  |.||
Zfish   362 DSSSKP--SSAPEFSLPPHPS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 110/195 (56%)
tbx16NP_571133.1 TBOX 30..217 CDD:238106 109/187 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 254 1.000 Inparanoid score I3166
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.960

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