DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx16l

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_017211524.1 Gene:tbx16l / 30254 ZFINID:ZDB-GENE-980526-171 Length:492 Species:Danio rerio


Alignment Length:462 Identity:153/462 - (33%)
Similarity:216/462 - (46%) Gaps:130/462 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IPDPFPSM-LPFNMPH--------------QQPHM-----MLPSRPTLPGVEAKLENNDLWQQFH 73
            :|:..|.: ||:.|.|              |...|     .|.|.|    |...|::.:||.:|.
Zfish     3 LPEERPVLDLPYQMNHLANNYGYYPQDCRTQYSRMNSAEAELTSLP----VHVSLQDRELWDKFS 63

  Fly    74 KIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQ 138
            .|||||:|||||||||||.:|:::||..:..|.|:::|||..:.:||::...|...|.::|..|.
Zfish    64 SIGTEMLITKSGRRMFPSCKVTVTGLNPKVKYVVIMDMVPFDNHKYKWNKDCWEVNGSSDPHLPN 128

  Fly   139 RMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAP 203
            |.::||||||.|..|....:.|:|:|||||||:|:|.:||.|||||||||||::|.:    |..|
Zfish   129 RFFIHPDSPAPGQKWMQYPISFHKLKLTNNTLNSNGLVVLHSMHKYQPRLHIVQSPD----PCTP 189

  Fly   204 QQ-----AFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRK------------- 250
            ..     .|.|||..|:|||||||..||||||||||||||||::|.:|.:.:             
Zfish   190 HNPGAYLRFTFPEAAFIAVTAYQNQEITKLKIDNNPFAKGFRDNGLNRKRFRDKGTQEMQDTDRQ 254

  Fly   251 ------------LNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSVSP---------- 293
                        ::::|.|.:..:.|.|..||.|.       :|.:..|:.|::|          
Zfish   255 VKLDLTANECGIISTAGMSQMVEDVDVSVSSSVDC-------RDTQNSSSVSLNPFISAFTNPSS 312

  Fly   294 AYYGATHPVANPMSPYLRHHLSYGPSG----AAGLPPS-IAAAY--FGGVPPQ------------ 339
            |...|.|.....:|...||..|...|.    .|.||.| ::..:  |..:.||            
Zfish   313 AGGAAAHQTHTLLSLSNRHFSSPRESNLNSVCAALPVSQLSTGHTSFSRLNPQETHHNSRPKIQL 377

  Fly   340 --------------ILPMPP----------ATYAPTVAPVSPVASQPVGSSTPTTSPRPSTS-TK 379
                          .||:||          |.....::|:|..|           :|||.|: ..
Zfish   378 QPPHPSLQCHDLELRLPLPPKLSRVQLSESALRNLEMSPLSDCA-----------NPRPLTNILN 431

  Fly   380 RNSFSIS 386
            |:.|..|
Zfish   432 RSCFRAS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 100/191 (52%)
tbx16lXP_017211524.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.870

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