DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and Tbx22

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_006257221.1 Gene:Tbx22 / 302369 RGDID:1589764 Length:533 Species:Rattus norvegicus


Alignment Length:342 Identity:130/342 - (38%)
Similarity:187/342 - (54%) Gaps:56/342 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK--F 121
            ::.:|:.:|||::||.|||||||||:|||||||:|:.:.|::....|.|:|::||:...||:  :
  Rat   105 IQVELQGSDLWKRFHDIGTEMIITKAGRRMFPSVRIKVKGMDPVKQYYVILDVVPVDSKRYRYVY 169

  Fly   122 SGSQWVPAGGAEPQ--SPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKY 184
            ..|||:.||..:..  :| |.|:|||||.:|.:|..|.:.|::||||||.:|..|||:|.|||||
  Rat   170 HSSQWMVAGNTDHSCITP-RFYVHPDSPCSGENWMRQIISFDRVKLTNNEMDDKGHIILQSMHKY 233

  Fly   185 QPRLHIIRS------SELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            :||:|::..      |.:...|....:.|.|.||||..||||||.:|||||||.||||||||:.|
  Rat   234 KPRVHVVEEDSRIDLSLIQSFPTEGVKTFSFKETEFTTVTAYQNQQITKLKIDRNPFAKGFRDPG 298

  Fly   244 QSRCKRKLNSSG--NSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSVSP--AYYGATHPVAN 304
            ::|        |  :..||:.....|.:....|..    .|.:..|:|| ||  :..||..|:.:
  Rat   299 RNR--------GVLDGFLETYPWRPSFTMDFKPFV----PDTQNGSSGS-SPVTSSGGAPSPLNS 350

  Fly   305 PMSPYLRHHLSYGPSGAAGLPPSIAAAYFGGVPPQILPMP-PATYAPTV--------APVSPVAS 360
            .:||             :..||::.      :||..:.|. |.||...|        .|.:....
  Rat   351 LLSP-------------SCSPPTVY------IPPSSIGMTHPETYLHNVNVPFCYRICPTNYWRP 396

  Fly   361 QPVGSSTPTTSPRPSTS 377
            ||....||...|..::|
  Rat   397 QPFVLPTPERLPSFNSS 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 97/195 (50%)
Tbx22XP_006257221.1 TBOX 105..300 CDD:238106 97/195 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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