DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx5a

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001300611.1 Gene:tbx5a / 30071 ZFINID:ZDB-GENE-991124-7 Length:492 Species:Danio rerio


Alignment Length:422 Identity:150/422 - (35%)
Similarity:209/422 - (49%) Gaps:113/422 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PSRPT------LPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLL 109
            ||..|      :.|::..|...:||.:||::||||||||:|||||||.:|.::||..:..|.:|:
Zfish    39 PSSQTTYIQQGMEGIKVYLHERELWTKFHEVGTEMIITKAGRRMFPSFKVKVTGLNPKTKYILLM 103

  Fly   110 EMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSG 174
            ::||..|.||||:.::|...|.|||..|.|:|:|||||||||||..|.:.|.|:|||||.||..|
Zfish   104 DVVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFG 168

  Fly   175 HIVLASMHKYQPRLHIIRSSELTQLPWAPQQAF---VFPETEFVAVTAYQNDRITKLKIDNNPFA 236
            ||:|.||||||||:||:::.|.... .:...||   |||||.|:|||:|||.:||:|||:|||||
Zfish   169 HIILNSMHKYQPRIHIVKADENNGF-GSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFA 232

  Fly   237 KGFRESG--------------------QSRCKRKLNSSGNSTLESEDDGSSVS-------SCDS- 273
            ||||.|.                    :|..::::.|| .|....:..|.|.|       ||:: 
Zfish   233 KGFRGSDDMELHRMSRMQSTKEYPVVPRSTVRQRVGSS-QSPFSGDVQGLSASGAISSQYSCENG 296

  Fly   274 ---------PQA-------------KRQRQD--------FEQ---DSTGSVSPAYYGATHPVANP 305
                     ||:             ||:.:|        :::   :|:.|....||   .|::..
Zfish   297 VSSTSQDLLPQSSSYHEHTQDYHCIKRKVEDECPAGEHPYKKPYVESSSSEDDHYY---RPLSYS 358

  Fly   306 MSPYLRHHLSYGPSGA-------AGLP------PSIAAAYFGGVPPQILP--------------- 342
            .|..|.....|.|..:       |..|      ||:....:.||||..:|               
Zfish   359 QSLGLSGGAPYRPESSQRQACMYASAPQPPEPVPSLEDISWPGVPPYSVPQMERLPYQHHFSAHF 423

  Fly   343 ----MPPA--TYAPTV----APVSPVASQPVG 364
                ||.|  .||.:|    :|...:.|...|
Zfish   424 ASRQMPEAHGMYASSVSHQCSPSGGIQSPSAG 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 106/209 (51%)
tbx5aNP_001300611.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 2/3 (67%)
TBOX 52..240 CDD:238106 106/188 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..352 2/20 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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