DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and Tbx15

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001382004.1 Gene:Tbx15 / 295315 RGDID:1308094 Length:602 Species:Rattus norvegicus


Alignment Length:388 Identity:140/388 - (36%)
Similarity:200/388 - (51%) Gaps:85/388 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK--F 121
            ::.:|:..|||::||.|||||||||:||||||:|||.::||:....|.:.:::||:.:.||:  :
  Rat   113 IQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNKRYRYVY 177

  Fly   122 SGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQP 186
            ..|:|:.||.|:...|.|:|:||||.|:|..|..|.:.|:|:|||||.||..|||:|.|||||||
  Rat   178 HSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGHIILHSMHKYQP 242

  Fly   187 RLHIIR---SSELTQLPWAP----QQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQ 244
            |:|:||   ||:|:.....|    .:.|.||||.|..||||||.:||:||||.||||||||:||:
  Rat   243 RVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGR 307

  Fly   245 SRC---------------KRKLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSVSPA 294
            :|.               .|.|.....:|::.:..||:.:|..:            .|||:.||:
  Rat   308 NRTGLEAIMETYAFWRPPVRTLTFEDFTTMQKQQGGSTGTSPST------------SSTGTPSPS 360

  Fly   295 YYGATHPVANPMSPYLRH------------------HLS-YGP-----------------SGAAG 323
              .::|.::...||...|                  :|| |.|                 ||...
  Rat   361 --ASSHLLSPSCSPPTFHLAPNTFNVGCRESQLCNLNLSDYPPCARSNMAALQSYPGLSDSGYNR 423

  Fly   324 LPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGSSTPTTSPRPSTSTKRNSFSIS 386
            |....|:|          ..|..|:.|...| |.::..|...|.|:.|...:...:..||..|
  Rat   424 LQSGTASA----------TQPSETFMPQRTP-SLISGIPTPPSLPSNSKMEAYGGQLGSFPTS 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 103/194 (53%)
Tbx15NP_001382004.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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