DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and tbx15

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001315362.1 Gene:tbx15 / 246222 ZFINID:ZDB-GENE-020529-1 Length:616 Species:Danio rerio


Alignment Length:306 Identity:126/306 - (41%)
Similarity:176/306 - (57%) Gaps:56/306 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DPFPSMLPFNMPHQQPHMMLPSRPTLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVS 95
            ||.||                  .::..::.:|:..|||::||.|||||||||:||||||:|||.
Zfish   100 DPSPS------------------ASMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVK 146

  Fly    96 LSGLEEEASYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQAL 158
            :.||:....|.:.:::||:.:.||:  :..|:|:.||.|:...|.|:|:||||.|:|..|..|.:
Zfish   147 IVGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVV 211

  Fly   159 LFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIR---SSELTQLPWAPQ----QAFVFPETEFVA 216
            .|:|:|||||.||..|||:|.||||||||:|:||   ||||:.....|.    :.|.||||.|..
Zfish   212 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDFSSELSPTKPVPTGEGVKTFSFPETVFTT 276

  Fly   217 VTAYQNDRITKLKIDNNPFAKGFRESGQSRC---------------KRKLNSSGNSTLESEDDGS 266
            ||||||.:||:||||.||||||||:||::|.               .|.|.....:.::.:..||
Zfish   277 VTAYQNQQITRLKIDRNPFAKGFRDSGRNRTGLEAIMETYAFWRPPVRTLTFEDFTNMQKQQGGS 341

  Fly   267 SVSSCDSPQAKRQRQDFEQDSTGSVSPAYYGATHPVANPMSPYLRH 312
            :.:|..:            .|||:.||:  ||||.::...||...|
Zfish   342 TGTSPTT------------SSTGTPSPS--GATHLLSPSCSPPTFH 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 104/195 (53%)
tbx15NP_001315362.1 TBOX 110..305 CDD:238106 104/194 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.040

Return to query results.
Submit another query.