DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and Tbx5

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_006530342.1 Gene:Tbx5 / 21388 MGIID:102541 Length:537 Species:Mus musculus


Alignment Length:386 Identity:144/386 - (37%)
Similarity:199/386 - (51%) Gaps:76/386 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PSRPT-------LPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVL 108
            ||.|.       :.|::..|...:||.:||::||||||||:|||||||.:|.::||..:..|.:|
Mouse    58 PSSPQAAFTQQGMEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILL 122

  Fly   109 LEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSS 173
            :::||..|.||||:.::|...|.|||..|.|:|:|||||||||||..|.:.|.|:|||||.||..
Mouse   123 MDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPF 187

  Fly   174 GHIVLASMHKYQPRLHIIRSSELTQLPWAPQQAF---VFPETEFVAVTAYQNDRITKLKIDNNPF 235
            |||:|.|||||||||||:::.|.... .:...||   |||||.|:|||:|||.:||:|||:||||
Mouse   188 GHIILNSMHKYQPRLHIVKADENNGF-GSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPF 251

  Fly   236 AKGFRESG-------------------QSRCKRKLNSSGNSTLESEDDGSSVSS-------CDS- 273
            |||||.|.                   :|..:.|: :|.:|...||....|.||       |:: 
Mouse   252 AKGFRGSDDLELHRMSRMQSKEYPVVPRSTVRHKV-TSNHSPFSSETRALSTSSNLGSQYQCENG 315

  Fly   274 ---------------PQAKR--------QRQDFEQDSTG--------SVSPA----YYGATHPVA 303
                           |.|:.        :|:|.|..||.        ..||:    :|.:.:|..
Mouse   316 VSGPSQDLLPPPNPYPLAQEHSQIYHCTKRKDEECSSTEHPYKKPYMETSPSEEDTFYRSGYPQQ 380

  Fly   304 NPMSPYLRHHLSYGPS--GAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQP 362
            ..:|...|...:...:  .|:..|||........:.....|..|:..:.||..|.|:...|
Mouse   381 QGLSTSYRTESAQRQACMYASSAPPSEPVPSLEDISCNTWPSMPSYSSCTVTTVQPMDRLP 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 107/208 (51%)
Tbx5XP_006530342.1 TBOX 72..260 CDD:238106 107/188 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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