DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and Tbx4

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_035666.2 Gene:Tbx4 / 21387 MGIID:102556 Length:552 Species:Mus musculus


Alignment Length:377 Identity:143/377 - (37%)
Similarity:200/377 - (53%) Gaps:63/377 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRY 119
            |:..::..|...:||::||:.||||||||:|||||||.:|.::|:..:..|.:|:::||..|.||
Mouse    68 TIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIVPADDHRY 132

  Fly   120 KFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKY 184
            ||..::|:.||.|||..|.|:|:|||||||||||..|.:.|.|:|||||.||..|||:|.|||||
Mouse   133 KFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKY 197

  Fly   185 QPRLHIIRSSELTQLPWAPQQAF---VFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSR 246
            ||||||:::.|.... .:...||   |||||.|::||:|||.:||:|||:|||||||||.|..|.
Mouse   198 QPRLHIVKADENNAF-GSKNTAFCTHVFPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSD 261

  Fly   247 CK-RKLNSSG--------------NSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSVSPAYY 296
            .: .:|.|..              :|.|.::.|.|.:.|     |.:..|.::.::...:.   :
Mouse   262 LRVARLQSKEYPVISKSIMRQRLVSSQLSAKPDVSPLHS-----AHQALQHYQYENGAHMQ---F 318

  Fly   297 GATHPVANPMSPY-------LRHHLSYGPSGAAGL-----------PPSIA-AAYFGGVPP---- 338
            .|..|...|::.:       |.:|.......|..|           |.|:. ..||...||    
Mouse   319 AAAEPQDLPLNTFPTQRDSSLFYHCLKRRDSARHLDLPCKRSYLETPSSVGDDHYFRSPPPYDQQ 383

  Fly   339 --------QILPMPPATYA---PTVAPVSPVASQPVG--SSTPTTSPRPSTS 377
                    ::.|.....|:   |.:|.||.|...|..  |....||..|.||
Mouse   384 MLSPSYCSEVTPREACMYSSSGPEIAGVSAVDDLPPPPLSCNMWTSVSPYTS 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 105/189 (56%)
Tbx4NP_035666.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50
TBOX 71..260 CDD:238106 105/189 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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