DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and Tbx3

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_035665.2 Gene:Tbx3 / 21386 MGIID:98495 Length:741 Species:Mus musculus


Alignment Length:492 Identity:160/492 - (32%)
Similarity:221/492 - (44%) Gaps:155/492 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IMQRIPDPFPSMLPFNMPHQQPHM-----MLPSRPTLPGVEAKLENNDLWQQFHKIGTEMIITKS 84
            ||.::.....:.:||:....|.|:     |.|........:..||..:||.||||.||||:||||
Mouse    64 IMDQLVGAAETGIPFSSLGPQAHLRPLKTMEPEEDVEDDPKVHLEAKELWDQFHKRGTEMVITKS 128

  Fly    85 GRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPAT 149
            ||||||..:|..|||:::|.|.:|::::...||||||..|:|:.||.|:|:.|:|||:|||||||
Mouse   129 GRRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPAT 193

  Fly   150 GAHWQSQALLFNKVKLTNNTLDSSG--------------------HIVLASMHKYQPRLHIIRSS 194
            |..|.|:.:.|:|:|||||..|..|                    ..:|.||||||||.||:|::
Mouse   194 GEQWMSKVVTFHKLKLTNNISDKHGFTLAFPSDHATWQGNYSFGTQTILNSMHKYQPRFHIVRAN 258

  Fly   195 ELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRC-KRK-------- 250
            ::.:||::..:.::||||||:||||||||:||:|||||||||||||::|..|. |||        
Mouse   259 DILKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLQSMR 323

  Fly   251 -------------------------------LNSSGNSTL------ESEDDGSSVS-------SC 271
                                           ::..|.|.|      |:|.|..:.|       :|
Mouse   324 VFEERHKKETSDESSSEQAAFNCFAQASSPAVSIVGTSNLKDLCPSEAESDAEAESKEEHGPEAC 388

  Fly   272 DSPQAKRQRQDFEQDSTGSVSPAYYGATHPVANP-----------MSPYLRH------------- 312
            |:  ||......|:......|||......| |.|           .||..||             
Mouse   389 DA--AKISTTTAEEPGRDKGSPATRAQLFP-AEPSRARDTARLDKASPDSRHSPATISSSTRVPG 450

  Fly   313 ----------------------------------------HLSYGPSGAAGLPPSIAA-AYFGGV 336
                                                    ||:.||....|..|.:|. .:|.|.
Mouse   451 ADERRSPGREGPVATKVDEARAIPAKDAFAPLSVQTDATAHLAQGPLPGLGFAPGLAGQQFFNGH 515

  Fly   337 PPQILPMPPATYA------PTVAPVSPVASQPVGSST 367
            |   |.:.|..:|      ...|.:.|:.:...|:||
Mouse   516 P---LFLHPGQFAMGGAFSSMAAGMGPLLATVSGAST 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 108/206 (52%)
Tbx3NP_035665.2 T-box 105..305 CDD:366363 106/199 (53%)
TBX 323..402 CDD:372213 12/80 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 369..469 19/102 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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