DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and T

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_033335.1 Gene:T / 20997 MGIID:98472 Length:436 Species:Mus musculus


Alignment Length:377 Identity:127/377 - (33%)
Similarity:176/377 - (46%) Gaps:78/377 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PTLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCR 118
            ||...:...||.::||.:|.::..|||:||:||||||.::|::|||:..|.|..||:.|...:.|
Mouse    37 PTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVTADNHR 101

  Fly   119 YKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHK 183
            :|:...:|||.|..|||:|..:|:|||||..||||....:.|:||||||. |:..|.|:|.|:||
Mouse   102 WKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIMLNSLHK 165

  Fly   184 YQPRLHIIRSSELTQLPWAPQQ---AFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQS 245
            |:||:||:|..       .||:   :..||||:|:|||||||:.||.|||..|||||.|.::.:.
Mouse   166 YEPRIHIVRVG-------GPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKER 223

  Fly   246 R-----------CKRKLNSS------GNSTL------ESEDDGS----SVSSCD----------- 272
            .           |::...|.      |..||      ..:..||    |...|:           
Mouse   224 NDHKDVMEEPGDCQQPGYSQWGWLVPGAGTLCPPASSHPQFGGSLSLPSTHGCERYPALRNHRSS 288

  Fly   273 ---SPQAKRQRQDFEQDSTG---------------------SVSPAYYGATHPVANPMSPYLRHH 313
               ||.|.|.......|::.                     |:.|..:.|:.|..:...|.|   
Mouse   289 PYPSPYAHRNSSPTYADNSSACLSMLQSHDNWSSLGVPGHTSMLPVSHNASPPTGSSQYPSL--- 350

  Fly   314 LSYGPSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGS 365
              :..|.....|.|..|....|:..|.....||.|.|....||...|...||
Mouse   351 --WSVSNGTITPGSQTAGVSNGLGAQFFRGSPAHYTPLTHTVSAATSSSSGS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 90/189 (48%)
TNP_033335.1 T-box_TBXT 41..219 CDD:410328 90/185 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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