DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx6

DIOPT Version :10

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_705952.2 Gene:tbx6 / 192294 ZFINID:ZDB-GENE-020416-5 Length:874 Species:Danio rerio


Alignment Length:453 Identity:156/453 - (34%)
Similarity:225/453 - (49%) Gaps:97/453 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QQLAHEIYRQQIMQRIPDPF--------PSMLPFNMPHQQPHMMLPSRPTLP--GVEAKLENNDL 68
            |:|:...||.:.:...|...        |::|       :||....| |..|  .|..:|||..|
Zfish    15 QRLSDCYYRDRDVPLYPSTCEMAARALPPALL-------KPHANTDS-PATPQDSVRMELENAGL 71

  Fly    69 WQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAE 133
            |:||..:|||||:||.||||||.:||.||||.....|.:||::||:...||:|..:.|...||||
Zfish    72 WKQFSTVGTEMIVTKKGRRMFPQLRVKLSGLNPSLRYILLLDIVPVDSSRYRFQDNSWQVVGGAE 136

  Fly   134 PQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQ 198
            .:.|.|:::||||||||.|||::.:.|::.||||||||:.|:|:|.|:|:||||:|:|.:.::  
Zfish   137 ARLPDRVFIHPDSPATGEHWQNRTISFHRAKLTNNTLDAQGYIILHSLHRYQPRVHVIEARDV-- 199

  Fly   199 LPWA-PQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESG-------QSRCKRKLNSSG 255
            |.|. .|.:|.||||:|:.||||||::||:|||::|||||||||:|       ::|.|||:.||.
Zfish   200 LMWGRTQHSFTFPETQFITVTAYQNNKITELKINSNPFAKGFRENGMNCKKQREARLKRKITSSQ 264

  Fly   256 NSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSVSPAY---------YGATHPVANPMSPYLR 311
            ...|:.|    |...|||.:...|..|....:...::.|.         ..::||........|.
Zfish   265 EECLDIE----SCDPCDSTELLPQSVDLPSSALTIMNTALPITDSGFHTEVSSHPDQTDSDQTLV 325

  Fly   312 HHLSYGPSGAAGLPPSI-------------------------AAAYFGGVP-PQI-----LPMPP 345
            ...::..|   .:|.|:                         .:.|....| ||:     :|...
Zfish   326 LEQAFLTS---EMPSSMESQQQTTSETNVNNALMDETGQMMDLSGYTSSFPTPQLSSHTSVPQSS 387

  Fly   346 ATYA------------PTVAPVSPVASQPVGSSTP----------TTSPRPSTSTKRNSFSIS 386
            :.|:            |..:.:|...|.|..||.|          |..|..:||...:..|||
Zfish   388 SMYSVVSSTQSSDLELPQASSISSPHSMPAYSSIPSAEYPGVNSSTAMPASTTSLSDSYPSIS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 T-box_Drosocross-like 59..241 CDD:410332 100/182 (55%)
tbx6NP_705952.2 T-box_TBX6 62..243 CDD:410322 100/182 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..396 6/31 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..453 7/23 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..551
PHA03247 <481..799 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..626
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..695
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 720..776
Blue background indicates that the domain is not in the aligned region.

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