DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx-40

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_502852.1 Gene:tbx-40 / 190679 WormBaseID:WBGene00006559 Length:380 Species:Caenorhabditis elegans


Alignment Length:305 Identity:69/305 - (22%)
Similarity:126/305 - (41%) Gaps:25/305 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KLENNDLW-QQFHKIGTEMIITKSG-RRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGS 124
            ::...|.| .|:..:  |||:...| :.:||.:..:::||||::.|.|||.:....:.||.|...
 Worm    10 QMAEEDRWLTQYPNM--EMIVNNKGPKPIFPELNFNITGLEEKSRYVVLLSIQKFDNIRYGFKNG 72

  Fly   125 QWVPA---GGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNT--LDSSGHIVLASMHKY 184
            :|.|:   ...:.:...:.:||||....|.....:.:.|:.|::||:.  :|......:.:||||
 Worm    73 KWGPSKVRHATKKEQEIKYFLHPDGTKLGEELMKETIKFDTVRITNHKKFMDKDNVFFVETMHKY 137

  Fly   185 QPRLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRI--TKLKIDNNPFAKGFRESGQSRC 247
            .|   ::....:|.:..| ..:......:|..||.|..:.|  .|.|...|...:...:.|..| 
 Worm   138 VP---VLTVKNITNVESA-NHSMRMEVAQFFPVTVYNQESIGNWKSKFHKNATFENRLDGGNKR- 197

  Fly   248 KRKLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDF-EQDSTGSVSPAYYGATHPVANPMSPYLR 311
             :..||....:.:...:.:.::..|..|...|.::: |..::|.:......:.|..  |.:.|..
 Worm   198 -KNTNSREEPSSKRSKNETEIAVLDILQVASQSENYNESTNSGRLQNEISSSIHQF--PSTSYQN 259

  Fly   312 HHLSYGPSGAAGLPPSIAAAY---FGGVPPQILPMPPATYAPTVA 353
            .:....|:  ...||..|..:   |.....|..|......||..|
 Worm   260 QYPHAYPT--VNTPPIYAQQFPAPFDEKQNQFYPKTDENLAPNCA 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 48/191 (25%)
tbx-40NP_502852.1 T-box 24..186 CDD:279278 44/167 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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