DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx-39

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_502851.1 Gene:tbx-39 / 190678 WormBaseID:WBGene00006558 Length:396 Species:Caenorhabditis elegans


Alignment Length:341 Identity:79/341 - (23%)
Similarity:140/341 - (41%) Gaps:50/341 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LENNDLWQQFHKIGTEMIITKSGRRM-FPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQW 126
            :...|.|:|::. ..|||:...|.:: ||.:..:::||||::.|.|||.:....:.||.:...:|
 Worm    11 MAEEDRWKQWYP-NMEMIVNNKGPKLIFPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRNGKW 74

  Fly   127 VPA---GGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNT--LDSSGHIVLASMHKYQP 186
            .|:   ...:.:...:.:||||....|.....:.:.|:.|::||:.  :|......:.:||||.|
 Worm    75 GPSKVRHATKKEQEIKYFLHPDGTKLGKELMKETIKFDTVRITNHKKFMDKDNVFFVETMHKYVP 139

  Fly   187 RLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRI--TKLKIDNNPFAKGFRESGQSRCKR 249
               ::....:|.:..| ..:......:|..||.|..:.|  .|.|...|. ..|.|..|.:: ::
 Worm   140 ---VLTVKNITNVESA-NHSMRMEVAQFFPVTVYNQESIGNWKSKFHKNS-TYGNRLDGGNK-RK 198

  Fly   250 KLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGS--------------VSPAY---YG 297
            ..:||...|.:...:.:.::..|..|...|.::: .:||.|              .|.:|   |.
 Worm   199 NTDSSEERTSKRSKNETEIAVSDILQVASQSENY-NESTNSGRLQNEISSSIHQFPSTSYQNQYP 262

  Fly   298 ATHPVANPMSPYLRH--------HLSYGPSGAAGLPPSIA--AAYFGGVPPQILPMPPATY--AP 350
            ..:|..|....|::.        |..:.|.....   .:|  ..|...||...:......:  ||
 Worm   263 HAYPTVNTPPIYVQQFTALFDEIHNQFDPKTKQN---RVAKNVQYLSSVPQFAINQKENIHQNAP 324

  Fly   351 TVAPVSPVASQ-PVGS 365
            .. |||...:| |.||
 Worm   325 DY-PVSQFPNQYPYGS 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 49/189 (26%)
tbx-39NP_502851.1 T-box 9..180 CDD:279278 44/173 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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