DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and tbx-33

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_499506.2 Gene:tbx-33 / 190493 WormBaseID:WBGene00006552 Length:420 Species:Caenorhabditis elegans


Alignment Length:414 Identity:92/414 - (22%)
Similarity:157/414 - (37%) Gaps:97/414 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SMQELMDMRMQQQLAHEIYRQQIMQRIPDPFPSMLPFNMPHQQPHMMLPSRPTLPGVEAKLENND 67
            :.|...||:.|.|:..: |.|.......|      ||...:|..|     :|.:..|..: :..|
 Worm    41 NFQAPWDMQQQIQMFQQ-YHQNFQGGYSD------PFTYQNQYAH-----QPKIVTVTLQ-DPQD 92

  Fly    68 LWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCV---LLEMVPIGDCRYKFSGSQW--- 126
            ||::.|.:..|..:..:||::||::...:..|..|::|.|   |..|||.   :.::|...|   
 Worm    93 LWKELHYLSNEQNVLNNGRKIFPALNYKVEHLNPESNYKVEILLRRMVPY---QIQYSNGSWSRK 154

  Fly   127 -VPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIV------------- 177
             |.:........:::::   ...||.......|..:.||:.|...|:...:.             
 Worm   155 NVQSKKTIAMKTEKVFV---GEFTGQDIMRTGLDLSDVKVFNIGSDNKKKVTPYEEMSDAEKREY 216

  Fly   178 -------------LASMHKYQPRL---HIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRIT 226
                         :::..||.|.|   .|:.:.||..:     ..|....|:|..|::|:|..:.
 Worm   217 DTQYSKKKTSMLEVSNECKYIPVLIINEILPNQELRLV-----GEFENEITQFATVSSYKNHIVK 276

  Fly   227 KLKIDNNPFAKGFRESGQSRCKRKLNSSGNSTLESEDDG---SSVSSCDSPQAKRQRQDFEQDST 288
            .|:...||.::|..:....:..::..||..|.|||....   :|||: .:|            ||
 Worm   277 ALRTAANPTSRGDAKQEAVQVGKQWRSSNKSLLESLRPSMICTSVST-TAP------------ST 328

  Fly   289 GSVSPAYY-GATHPVAN--PMSPYLRHHLSYG--------PSGAAGLP-PSIAAAYFGGVPPQIL 341
            ...:|..| |.:.|.:|  ||:|......:|.        |......| ||::..|      ...
 Worm   329 NFHAPLQYPGTSSPSSNFAPMTPSTSFDSAYSSFNVTSSTPEQMCYNPIPSMSTDY------SFC 387

  Fly   342 PMPPATYAPTVAPVSPVASQPVGS 365
            ....||.:|   |:.|.|:.|..|
 Worm   388 SFDSATSSP---PLQPTATSPEAS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 45/222 (20%)
tbx-33NP_499506.2 TBOX 83..296 CDD:214656 45/224 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.