DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx-37

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_499444.2 Gene:tbx-37 / 189977 WormBaseID:WBGene00006556 Length:313 Species:Caenorhabditis elegans


Alignment Length:237 Identity:80/237 - (33%)
Similarity:128/237 - (54%) Gaps:14/237 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GVEAKLENNDLWQQFHKIGTEMIIT-KSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKF 121
            |:|..|...::|::|:. .||||:| |.||.:||.:..::.||:.::.|.:.:.:..:...:|||
 Worm     9 GIEVSLNKPEIWEKFYP-KTEMIVTRKRGRVIFPHLDYNVKGLDPDSLYSIYIHLERVDGIKYKF 72

  Fly   122 SGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLA-SMHKYQ 185
            ...:|..||..:|..|.:...||....||..|.|:.:.|..:|:||:..:....::|| |:|||.
 Worm    73 DAGEWKEAGKGDPILPIQYKEHPRGKRTGTEWMSEPVSFAHLKITNDPENKDQKLILAQSLHKYI 137

  Fly   186 PRLHIIRSSELTQLPWAPQQAFVFPE-----TEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQS 245
            |.|||   .:|.......|..|...|     |:|:.||||||:.:||||:.:|.||.|||.:|:.
 Worm   138 PVLHI---KQLDPYKGTFQMDFHGVEFRLEATQFIVVTAYQNEELTKLKVHHNKFASGFRSNGKR 199

  Fly   246 RCKRKLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDS 287
            |...:..:|.||  ..:...|::||. :|.|.....|:.|.:
 Worm   200 RLSSESENSENS--PPKRSASAISSL-TPPAISPPMDYTQQN 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 69/193 (36%)
tbx-37NP_499444.2 TBOX 9..199 CDD:238106 69/193 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156538
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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