DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx-31

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_508308.1 Gene:tbx-31 / 183272 WormBaseID:WBGene00006550 Length:747 Species:Caenorhabditis elegans


Alignment Length:480 Identity:90/480 - (18%)
Similarity:147/480 - (30%) Gaps:183/480 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 EMIITKSGR-RMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGS----QWVPAGGAE-PQS 136
            |.::||..: .:...:...|.||.....|.:..::..|.:.:|||:|:    .:.|...:| |..
 Worm    32 EQMLTKRKKTNISQDLHYLLLGLNPRELYQISFKLARIDEKKYKFNGNFNEGDYYPHKNSEIPME 96

  Fly   137 PQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELT-QLP 200
            .....:|.|...|||.|....:.|.|:.::....|....::|.|:|.|.|.|....||.:: ::|
 Worm    97 DTEEIVHSDGYQTGARWMKTGVYFPKIGISKEQPDKERCLLLESLHAYFPVLVFTTSSGISLEVP 161

  Fly   201 -WAPQ-------------------------------------------------QAF-------- 207
             |:.:                                                 |.|        
 Worm   162 VWSQKFVTTMTSSNRSVKRREKRKLEETAGPAAKKTPDIIETTPEDVVPEVYNAQYFYQMQNNTV 226

  Fly   208 VFPETEFVAVTAYQNDRITKLKIDNNPFAK---GFRESGQSRCKRKLNSSG----NSTLESE--- 262
            :..|::|.:..|.|.|    |..|...||:   .|..|.||.....|:|..    :||:.|:   
 Worm   227 ISSESKFSSPLALQQD----LTEDFGTFAQLDAHFNVSVQSCSSSSLSSPAALKHDSTVSSDSDF 287

  Fly   263 DDGSS----------------------------------------------VSSCDSPQAKRQ-- 279
            ||.:|                                              :|:..||.|..|  
 Worm   288 DDKNSEEFDAVFEYIDQQFSNHDQNPMDQQSKSIDLNQTTWAPQSINNPGYLSTASSPAALNQDS 352

  Fly   280 -----------------------------------RQDFEQD----STGSVSPAYYG-ATHPVAN 304
                                               ::|..||    :|.:..|.... .::...|
 Worm   353 SASEKSSIVRDKKSDENCLDEFDRVFNELDQQFTPKEDQVQDLSNCTTWNQEPINNSIQSNQFIN 417

  Fly   305 PMSPYLRHH----LSYGPSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGS 365
            |...|...|    :|:         ||..:...|.:.||.|..||......:..:||:...|..:
 Worm   418 PELFYFIFHKCLIISW---------PSCLSCCRGSILPQHLRTPPLVPISQLLIISPLVLPPYHN 473

  Fly   366 ST---PTTSPRPSTSTKRNSFSISA 387
            .|   .|.||..||......|:.::
 Worm   474 FTTGSATVSPFASTPANMTIFNFTS 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 47/234 (20%)
tbx-31NP_508308.1 TBOX 15..198 CDD:214656 34/165 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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