DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx-9

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_499286.2 Gene:tbx-9 / 176449 WormBaseID:WBGene00006546 Length:292 Species:Caenorhabditis elegans


Alignment Length:323 Identity:108/323 - (33%)
Similarity:159/323 - (49%) Gaps:66/323 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENND--LWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKF 121
            |:..:|.:.  ||:.||....|||:||:||::||.:...:.||:|...|.::|::.|:|:.|:||
 Worm     4 VKVSIEGSQETLWKIFHAEVNEMIVTKNGRKLFPKLEYIVEGLDENKLYAIMLQLQPVGESRFKF 68

  Fly   122 SGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTN-NTLDSSGHIVLASMHKYQ 185
            ||.:|...|.||.|...:...|.|....|:.|...::.|::||::| :..:::..|.|.|||||.
 Worm    69 SGGKWQETGKAEKQVDAKKMWHADGVRKGSDWMWSSICFDRVKISNYSESNNASMIYLNSMHKYI 133

  Fly   186 PRLHIIRSSELTQLPW-APQQA------FVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            |.|.|..|.  ::.|: .||.:      ..||.|||:|||||||.:||.|||.:|.||||||:..
 Worm   134 PVLTIYESP--SESPFCVPQSSNQIVATAKFPHTEFIAVTAYQNQKITDLKIKHNSFAKGFRDGN 196

  Fly   244 QSRCKRKLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSVSPAYYGATHPVANPMSP 308
            .||.:|.         .|..|||: |...||:::         |...|:|.   .:.|..||...
 Worm   197 LSRKRRS---------PSYSDGSN-SQSPSPKSR---------SPPEVAPL---QSMPPINPFLF 239

  Fly   309 YLRHHLSYGPSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGSSTPTTS 371
            |..|.||      ..||.....|:     |.:.|:|                     |||::|
 Worm   240 YFPHMLS------ENLPVQFPFAF-----PFLSPLP---------------------STPSSS 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 78/195 (40%)
tbx-9NP_499286.2 TBOX 3..198 CDD:238106 78/195 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156544
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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