DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and mab-9

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_493750.1 Gene:mab-9 / 173441 WormBaseID:WBGene00003106 Length:346 Species:Caenorhabditis elegans


Alignment Length:306 Identity:121/306 - (39%)
Similarity:177/306 - (57%) Gaps:37/306 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 MQRIPDPFPSMLPFNMPHQ---QPHMMLPSRP-TLPGVEAKLENNDLWQQFHKIGTEMIITKSGR 86
            ::.:.|...|.:|...|.:   :|.:.|..:. .|| :|.|||.::||.:|..:|||||||||||
 Worm    41 VEDVDDVDLSSIPSKSPERSRGRPKIGLKMKEGNLP-IECKLEGSELWAKFFDLGTEMIITKSGR 104

  Fly    87 RMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPAT 149
            ||||:::||.:.:..:|.|.:.|::||:...||:  ::.|.|:.||.|||....|.|||||||.|
 Worm   105 RMFPTVKVSFTNVILDALYYIFLDVVPVDSKRYRYIYNKSAWLTAGKAEPVPKNRYYLHPDSPFT 169

  Fly   150 GAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQ--------- 205
            |.......:.|.|.|||||.:|.:||::|.||||||||:||::..:..  |..|.:         
 Worm   170 GDQLLKHVISFEKTKLTNNEVDKTGHLILNSMHKYQPRIHIVQRQKAN--PLDPNKVVMSEEKHC 232

  Fly   206 AFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE-SGQSRCKRKLNSSGNSTLESEDDGSSVS 269
            .:.||||:|:|||||||..||||||:.||||||||: :|:|..:.: .|.|:..|.:....|:: 
 Worm   233 TYTFPETQFMAVTAYQNQLITKLKIEKNPFAKGFRDPTGRSPDEME-RSPGDMMLSNFYHSSAL- 295

  Fly   270 SCDSPQAKRQRQDFEQ--DSTGSVSPA---YYGATHPVAN--PMSP 308
                     |:..|:|  ..|..::|:   .|....|..|  |.:|
 Worm   296 ---------QQAMFQQCLSKTLQLNPSIMMLYQNVFPTGNSLPAAP 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 98/198 (49%)
mab-9NP_493750.1 TBOX 76..272 CDD:238106 98/198 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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