DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx19

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_003198807.1 Gene:tbx19 / 100538180 ZFINID:ZDB-GENE-110411-5 Length:436 Species:Danio rerio


Alignment Length:364 Identity:130/364 - (35%)
Similarity:182/364 - (50%) Gaps:77/364 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PTLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCR 118
            ||...::..||:.:||::|.::..|||:||:||||||.::||::||:..|.|..||:..|....|
Zfish    44 PTEKQLKVSLEDAELWRKFKEVTNEMIVTKNGRRMFPVLKVSVTGLDPNAMYSFLLDFTPADGHR 108

  Fly   119 YKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHK 183
            :|:...:|||||..||.|...:|:|||||..||||....:.||||||||. |:..|.|:|.|:||
Zfish   109 WKYVNGEWVPAGKPEPHSHSCVYIHPDSPNFGAHWMKAPVSFNKVKLTNK-LNGGGQIMLNSLHK 172

  Fly   184 YQPRLHIIR----SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQ 244
            |:|::||:|    ...:|.:.        |.:|:|:|||||||:.||.|||.:|||||.|.::  
Zfish   173 YEPQIHIVRVGGSHRMVTNIS--------FTDTQFIAVTAYQNEEITALKIKHNPFAKAFLDA-- 227

  Fly   245 SRCKRKLNSSGNSTLES--EDDGSSVSSC----DSPQAKRQRQDFEQDSTGSVS----------- 292
                 |..|...:.||.  |:....:..|    .:|           ||..|.|           
Zfish   228 -----KERSHPKNHLEPPVENQHMGIPHCGWFISNP-----------DSLCSASGGNFPYPGGLP 276

  Fly   293 -----------PAYYGATHPVANPMSPYL-RHH------LSYGPSGAAGLPPSIAAAYFGGVPPQ 339
                       |:.:|  |..|...|||| |||      :|...:.:.|:........:.||.| 
Zfish   277 LTHHHHGYKHYPSLHG--HRAAPYPSPYLPRHHHRGHNTVSLSDNLSPGVQMFSGHESWTGVSP- 338

  Fly   340 ILPMPPATYAPTVAPVSPVASQ------PVGSSTPTTSP 372
              |.|.|..:...||.||.||.      .|.|.|.::||
Zfish   339 --PGPAAMLSMQPAPNSPGASSQYPCLWTVSSCTVSSSP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 87/190 (46%)
tbx19XP_003198807.1 TBOX 48..230 CDD:238106 88/197 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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