DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and tbx21

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001164070.1 Gene:tbx21 / 797797 ZFINID:ZDB-GENE-080104-3 Length:609 Species:Danio rerio


Alignment Length:473 Identity:154/473 - (32%)
Similarity:219/473 - (46%) Gaps:96/473 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PRVTLPGVEMT------LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLE 107
            |..:|||::::      |.|..||.:||:..|||||||.||||||.:..:::.|:..::|.:.::
Zfish   138 PMYSLPGLQVSGKTQVLLNNYPLWAKFHKYQTEMIITKQGRRMFPFLSFNITSLDPSAHYNIYVD 202

  Fly   108 MVPIGDCRYKFSGSQWVPAGGAEPQSP-QRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSG 171
            :|......:::.|.:||..|.||...| .|||:|||||.||.||..|.:.|.|:|||||...::.
Zfish   203 VVLADQHHWRYQGGKWVQCGKAEGNMPGNRMYMHPDSPNTGTHWMRQEVSFGKLKLTNNKGSSNN 267

  Fly   172 ---HIVLASMHKYQPRLHVIRT-ADLAQIPW--APQQAFVFAETEFVAVTAYQNDRITKLKIDNN 230
               .|||.|:||||||||::.. .|..:.|:  :..|.|||.||:|:|||||||..||:||||:|
Zfish   268 VAQMIVLQSLHKYQPRLHIVEVKEDGTEDPFLTSKTQTFVFPETQFIAVTAYQNADITQLKIDHN 332

  Fly   231 PFAKGFRETGQSRC----KRKMSSSPTGEDQDQSPS-LSHSQSQSESDMSPTKGGGETAGGTSSI 290
            |||||||:...:..    ..:::.|||...|..|.| ..|....|:..|||.             
Zfish   333 PFAKGFRDNYDTLYAPPDPDRLTPSPTESQQLLSGSCYPHQPYLSDQYMSPL------------- 384

  Fly   291 GDSDGPQIK----------------RLRSNGSACSLSSSLDDQSVP-----------GASSLALG 328
                 ||.:                ...|..|...|||   .|:||           ..:|.:|.
Zfish   385 -----PQSRFYSREPVSMTQPCPKDPTSSPHSRWYLSS---QQAVPPNRLDFSAYETEYTSNSLY 441

  Fly   329 SPPPHLHSHSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMY- 392
            .|.| |.|..| |||...|.:.     |.....|...|.    |.|..|||         ||.| 
Zfish   442 KPFP-LQSSPH-HPLSYYSENP-----FTSGAVSSANPG----AWTASGRP---------SPQYL 486

  Fly   393 -------PPAAMLQAGLGPHPGLNLPPGVSGADLISDESGAEELELDVGSETSTLEQSTQEQPLE 450
                   |.:::......|.|..:..|..:.:...:..|..|.....:..:.|  ::||::..:|
Zfish   487 NHPHHSKPTSSLSWFRAVPSPAASSSPTATNSRFHASPSLLEPQRQPLLQDKS--KESTEDTWIE 549

  Fly   451 QPSTRSKGFSISAILGGG 468
            .||.:|...:.|.:..||
Zfish   550 APSVKSVDSADSGLFEGG 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 92/199 (46%)
tbx21NP_001164070.1 TBOX 150..343 CDD:238106 91/192 (47%)
T-box_assoc 363..608 CDD:292794 56/248 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.