DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and Tbx18

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_076303.3 Gene:Tbx18 / 76365 MGIID:1923615 Length:613 Species:Mus musculus


Alignment Length:427 Identity:152/427 - (35%)
Similarity:210/427 - (49%) Gaps:104/427 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IPDPFPPMLPIPMPRHVIMPPRVTLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSV 93
            :|....|..|:|.|:    .|||.|.|.|       |||:||:|||||||||:||||||:||:.:
Mouse   129 VPGLARPGTPLPAPQ----APRVDLQGAE-------LWKRFHEIGTEMIITKAGRRMFPAMRVKI 182

  Fly    94 SGLEDESNYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPIL 156
            |||:....|.:.:::||:.:.||:  :..|:|:.||.|:...|.|:|:||||||:|..|..|.|.
Mouse   183 SGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVIS 247

  Fly   157 FNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRT---ADLAQIPWAPQ----QAFVFAETEFVAV 214
            |:|:|||||.||:.|||:|.||||||||:||||.   .||:.|...|.    :||.|.||.|..|
Mouse   248 FDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTV 312

  Fly   215 TAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKG 279
            |||||.:||:||||.||||||||::|::|.                                   
Mouse   313 TAYQNQQITRLKIDRNPFAKGFRDSGRNRM----------------------------------- 342

  Fly   280 GGETAGGTSSIGDSDG---PQIKRLRSNGSACSLSSSLDDQSVPG------ASSLAL----GSPP 331
                  |..::.:|..   |.::             :|..:.:||      .||.||    |:..
Mouse   343 ------GLEALVESYAFWRPSLR-------------TLTFEDIPGIPKQGNTSSSALLQGTGNAV 388

  Fly   332 PHLHSHSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDL-ACTYFGRP-HEYGGAI-------- 386
            |    .:|||.|...|.||... |...|...|...:..|. ||...|.. :.|..::        
Mouse   389 P----ATHPHLLSGSSCSSPAF-HLGPNTSQLCSLAPADYSACARSGLALNRYSTSLAETYSRLT 448

  Fly   387 -QASPMY-PPAAMLQAGLGPHPGLNLPPGVSGADLIS 421
             |:|..: ||.......:..:|.:|:..|.:..|..|
Mouse   449 NQSSETFAPPRTPSYVSVSSNPSVNMSMGGTDGDTFS 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 106/195 (54%)
Tbx18NP_076303.3 Engrailed homology 1 repressor. /evidence=ECO:0000305|PubMed:17584735 18..28
Nuclear localization signal. /evidence=ECO:0000305|PubMed:17584735 36..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..94
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..145 5/19 (26%)
TBOX 145..340 CDD:238106 110/201 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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