DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx2a

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_005165613.1 Gene:tbx2a / 573084 ZFINID:ZDB-GENE-990917-4 Length:690 Species:Danio rerio


Alignment Length:499 Identity:164/499 - (32%)
Similarity:236/499 - (47%) Gaps:127/499 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGS 121
            ::||:..:||.|||:|||||:||||||||||..::.|:||:.::.|.:|:::|...||||||..|
Zfish    94 KVTLEAKELWDQFHKIGTEMVITKSGRRMFPPFKVRVNGLDKKAKYILLMDIVAADDCRYKFHNS 158

  Fly   122 QWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLH 186
            :|:.||.|:|:.|:|||:||||||||..|.|:|:.|:|:|||||..|..|..:|.||||||||.|
Zfish   159 RWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFH 223

  Fly   187 VIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSR-------- 243
            ::|..|:.::|::..:.:||.||:|:||||||||:||:|||||||||||||:||..|        
Zfish   224 IVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKSLNFR 288

  Fly   244 --------------CK------------------RKMSSSPTG---------------------- 254
                          ||                  |....||||                      
Zfish   289 KQLAMPSMRMYDDQCKVDRDGGDSDDSSCEQTTGRDSVHSPTGPATSPLKFTRSREDKNFNESDN 353

  Fly   255 ---------------EDQDQSPSLSHSQS--------QSESDMSPTKGGGETAGGTSSIGDSDGP 296
                           |.:.|||.....:.        :.:.|.|.::...::|.....: |.|..
Zfish   354 ELDQHDDGMIRVSSPEQRPQSPFSPRCEDRVKDRLNLEKKGDYSDSRKENDSAFSIRHL-DKDKL 417

  Fly   297 QIKRLRSNGSACSLSSSLDDQSV-PGASSLALGSPPPHLHSHSHPHPLQARSASSVFMQHFQQNM 360
            ..:.::...|:...:.|:...:| .|.|.|.:.:..|...|.||   ||:.:.|.:..|||...:
Zfish   418 DARNVKDQDSSKKEADSVGMSTVKDGFSPLMVQTENPSHFSASH---LQSLALSGLHNQHFFNPL 479

  Fly   361 ---QSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAAMLQAGLGPHPGLNLPPGVSGADLISD 422
               ||||            ..|.::.        ..|:|....|:|              .|::.
Zfish   480 SSGQSLL------------FHPGQFA--------MTPSAFSTMGMG--------------HLLAS 510

  Fly   423 ESGAEELELDVGSETSTLEQSTQEQPLEQPSTRSKGFSISAILG 466
            .|||..||....|..||...:.....|.|....|:|.|:....|
Zfish   511 MSGASGLENGSLSSQSTSSPNPFPFHLSQHMLASQGISMPTFGG 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 107/184 (58%)
tbx2aXP_005165613.1 TBOX 92..277 CDD:238106 105/182 (58%)
TBX 297..372 CDD:204975 8/74 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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