DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx18

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_705951.1 Gene:tbx18 / 572713 ZFINID:ZDB-GENE-020529-2 Length:554 Species:Danio rerio


Alignment Length:479 Identity:167/479 - (34%)
Similarity:224/479 - (46%) Gaps:114/479 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PDPFPPMLPIPMPRH---VIMPPRVTLPGVEM--TLQNDDLWKQFHQIGTEMIITKSGRRMFPSM 89
            |:|...:|..|.|..   .::....|..|.||  .||..||||:||:|||||||||:||||||:|
Zfish    78 PEPEDVLLDSPQPASQGAQVLVQSATSSGEEMRVDLQGSDLWKRFHEIGTEMIITKAGRRMFPAM 142

  Fly    90 RLSVSGLEDESNYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQA 152
            |:.::||:....|.:.:::||:.:.||:  :..|:|:.||.|:...|.|:|:||||||:|..|..
Zfish   143 RVKIAGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMR 207

  Fly   153 QPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRT---ADLAQIPWAPQ----QAFVFAETE 210
            |.|.|:|:|||||.||:.|||:|.||||||||:||||.   .:|:.:...|.    :||.|.||.
Zfish   208 QVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKECGEELSPVKAVPTGDGVKAFSFTETV 272

  Fly   211 FVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSSSPTGEDQD-QSPSLSHSQSQSESDM 274
            |..||||||.:||:||||.||||||||::|::|    |......|... ..|||  .....|..:
Zfish   273 FTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNR----MGLEALVESYAFWRPSL--RTLTFEDIL 331

  Fly   275 SPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSH 339
            ..||.|  .||....:|             .||..||||    |.|        ||..||.|.:.
Zfish   332 GITKQG--AAGSHGVVG-------------SSAHLLSSS----SCP--------SPTFHLGSGAG 369

  Fly   340 P-----------HPLQ----------------------ARSASSVFMQHFQQNMQSLLRPSLVDL 371
            |           |||.                      :.|.||.::...:...          .
Zfish   370 PVCDYSTCSRTSHPLHRYGPSLSADSYSRLTSPTADAFSTSRSSTYVSGTESEA----------F 424

  Fly   372 ACTYFGRPHEYGGAIQASPMYPPAAML---------------QAGLGPHPGLNL--PPGVSGADL 419
            :||..|.|      ||...|....:.|               |:..|.:.|..|  |.|:.|.:.
Zfish   425 SCTQTGLP------IQIHSMPSTTSQLQYLMPGHAHNAFSTNQSTQGSYNGFRLHNPYGLYGYNF 483

  Fly   420 ISDESGAEELELDVGSETSTLEQS 443
            .:....|...|....::||.|..|
Zfish   484 STSPRLATSPEKAAATQTSFLGSS 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 107/197 (54%)
tbx18NP_705951.1 TBOX 109..304 CDD:238106 105/194 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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