DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and tbx6

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001007995.1 Gene:tbx6 / 493357 XenbaseID:XB-GENE-6257419 Length:517 Species:Xenopus tropicalis


Alignment Length:469 Identity:170/469 - (36%)
Similarity:226/469 - (48%) Gaps:92/469 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HEIYRQQIM----QRIPDPF------------PPMLPIPMPR------HVIMPPRVT--LPG-VE 57
            ||.||...:    ||....|            ||:.|:.:|.      ..:.||..|  ||| |:
 Frog    33 HEAYRYPELDVPGQRFDGLFPALDPSQRILGAPPLTPLSLPPGPALGFGQLQPPCETPQLPGNVK 97

  Fly    58 MTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQ 122
            |.|:|.:||||||.||||||||||||||||..::||:|||.:..|.:|.::|||.:.|||:...:
 Frog    98 MNLENKELWKQFHSIGTEMIITKSGRRMFPQCKVSVTGLEPDGKYLLLADIVPIDNSRYKWQEDR 162

  Fly   123 WVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHV 187
            |.|:|.|||:.|:|:|:||||||.|:||..|||.|:|:||||||||..|||:|.||||||||.|:
 Frog   163 WEPSGRAEPRLPERVYIHPDSPAPGSHWMKQPISFHKIKLTNNTLDQMGHIILHSMHKYQPRFHI 227

  Fly   188 IRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETG------------ 240
            :|..|:....|....:|.|.||.|:.||||||::||:|||..|||||||||.|            
 Frog   228 VRAQDVFSRRWGGCSSFTFPETLFLTVTAYQNEKITQLKIQTNPFAKGFREDGMKSKRDRSTRVK 292

  Fly   241 ---------------QSRCKRKMSSSP----TGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGG 286
                           :..|||.:.:.|    ..|:.|....|.......:....|......|...
 Frog   293 RKVIEPEEEEEEFQPEGECKRPLYTGPCDSTLSEELDIGRGLGIPLPSPDCSFHPITPPSRTPPS 357

  Fly   287 TSSIGDSDGPQIKRLRSNGSACSLSSSLDD-------QSVPGASSLALGS----PPPHLHSHSHP 340
            |    .:..|.:...:..|:|..:||...:       ||.|....:..||    |.....:.:..
 Frog   358 T----QTPNPSLTANQEQGAALEMSSQTPETFLQAAGQSYPEQPPVRGGSLYPCPTDGHGAQNQR 418

  Fly   341 HPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHE---YGGAIQASPMY-PPAAMLQAG 401
            |||..:.....|     |.:|..|..|           |.|   |||.:.....: ||:..:...
 Frog   419 HPLSVQRLPQAF-----QGLQESLGNS-----------PGEYKIYGGDVGCGGDFAPPSCAVAPS 467

  Fly   402 LGPHPGLNLPPGVS 415
            :.|... .||.|.|
 Frog   468 VRPSEE-RLPRGYS 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 113/214 (53%)
tbx6NP_001007995.1 T-box 100..278 CDD:307177 107/177 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..318 7/41 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..418 15/88 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - mtm9366
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6331
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.040

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