DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and vegt

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_988858.1 Gene:vegt / 394452 XenbaseID:XB-GENE-1033829 Length:455 Species:Xenopus tropicalis


Alignment Length:420 Identity:156/420 - (37%)
Similarity:202/420 - (48%) Gaps:84/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LP-GVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRY 116
            || .|..:|::..||.||||.|||||||||||||.|..::.:.||...:.|.:|::.||:.:.||
 Frog    44 LPNSVGASLEDQVLWAQFHQEGTEMIITKSGRRMLPQCKIRLFGLHPYAKYMLLVDFVPLDNFRY 108

  Fly   117 KFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKY 181
            |::.:||..||.|||..|.|.|:||||||.||||....|.|.|:||||||||..|||:|.|||:|
 Frog   109 KWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDAICFQKLKLTNNTLDQQGHIILHSMHRY 173

  Fly   182 QPRLHVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRE-------- 238
            :||.||:::.|:...||...|.|.|.||||.|||||||::||||||::|||||||||        
 Frog   174 KPRFHVVQSDDMYNSPWGLVQVFSFPETEFTAVTAYQNEKITKLKINHNPFAKGFREQERRHKRD 238

  Fly   239 -----TGQSRCKR----KMSSSPTGEDQDQSPSLSHSQSQSESDMSPT-----------KGGGET 283
                 ..||..||    |...||..|..|...:   ::.:.||.|.|.           ...|.|
 Frog   239 DVLKTLQQSPSKRQKRKKWEDSPEAEISDFPKA---TRVKEESIMDPAGVYQNWVSDHEANQGLT 300

  Fly   284 AGGTSSIGDSDGPQIKRLRSN--------------------GSACSLSSSLDDQSVPGA--SSLA 326
            .....|.|.:...|:....||                    |...|...:.|..:||.:  .|||
 Frog   301 PHSPESEGANQEQQVPSSSSNFYNRNPYRRSSQHLSSPYDLGEPSSRRLTPDVATVPDSDPDSLA 365

  Fly   327 LGSPPPHLHSHSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAI----- 386
            :      ||.....:..|.|:....|....|  |:..||.::..          .||...     
 Frog   366 V------LHVIPTQNSTQDRTCGVNFSMEAQ--MKQPLRGAMYS----------PYGAEQWMVPA 412

  Fly   387 --QASPM----YPPAAMLQAGLG-PHPGLN 409
              |..||    ||.....|..:. ||.|::
 Frog   413 QGQYRPMGYTAYPTDLSTQGAVAHPHSGMS 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 106/199 (53%)
vegtNP_988858.1 TBOX 51..234 CDD:238106 105/182 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..276 11/49 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..360 12/64 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - mtm9366
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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