DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and ocm

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster


Alignment Length:544 Identity:106/544 - (19%)
Similarity:160/544 - (29%) Gaps:219/544 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PFPPMLPIPMPRHVIMPPR--------VTLPGVEMTLQNDDLW--KQF--HQIGTEMIITKSGRR 84
            |.|..||: |.|.::...|        |.:.|      ....|  |.|  |..|.  ..||....
  Fly  1366 PDPQALPL-MARMLMNSMRNEKTNRLAVVMQG------RQSFWLVKGFLRHMQGN--ACTKPTPM 1421

  Fly    85 MFPSMRLSVSGLEDESNYCVLL--------EMVPIGDCRYKFSGSQW-VPAGGAEPQSPQRM--- 137
            ..|.:...::.|      |.||        |...:||    .||:.: |.||...||:...|   
  Fly  1422 THPLLTKKINVL------CSLLVKQRVRENEKKTLGD----GSGAPYEVLAGDVSPQTSLLMKNR 1476

  Fly   138 ------------YLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRT 190
                        .|.|..|:                :|.::..::|...:|              
  Fly  1477 SRDLKRKSQADERLLPSGPS----------------MTKSSKPSAGGYPIA-------------- 1511

  Fly   191 ADLAQIPWAPQQAFVFAETEFVAV-TAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSSSPTG 254
               |.:..:...||..:..:...| ||..|...||    |...|.|.|...:.   ||::.:.. 
  Fly  1512 ---ASVATSTTSAFASSSGKSTPVCTAKTNSASTK----NKSSATGIRSNIEF---RKVNHNDV- 1565

  Fly   255 EDQDQSPSL----------------SHSQSQSESDM-SPTKGGGETAGGTSSIGDSDGPQIKRLR 302
             |:.|.|.|                ||....|.||| |.|:     ......:.: :..::.:|:
  Fly  1566 -DELQIPELHQTDHRWVVLDIFDDFSHIFVPSFSDMISLTR-----IHSVMQVAE-ERQKVVKLQ 1623

  Fly   303 SNGSACSLSSSLDDQSVPGASS------LALGSPPP---------------HLHSHSHPHPLQAR 346
            ...:|     ..|....|.:..      |:|..|||               .::...|..|:|..
  Fly  1624 FFPNA-----PYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRH 1683

  Fly   347 SASSVF-------MQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAAMLQAGLGP 404
            ..|..|       ..||:.:.:|..:                            .||..:..:|.
  Fly  1684 RRSMAFWVLQINGQVHFEIDTESTAK----------------------------LAAQQKNAIGT 1720

  Fly   405 HPGLN------------------LPPGVSGADLISDESGAEELELDVGSETSTLEQSTQEQPLEQ 451
            .||||                  :||.|.......|:.|..:|.:|             ||..||
  Fly  1721 PPGLNVLKIPSQLSVEIEKNQDEVPPVVVIDSDEEDDDGERQLVID-------------EQDDEQ 1772

  Fly   452 PSTRSK------GFSISAILGGGS 469
            ..|..|      ||:|..:...|:
  Fly  1773 AETDVKQEVERTGFTIQTLPSSGA 1796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 43/215 (20%)
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439061
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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