DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx1

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_005168668.1 Gene:tbx1 / 368206 ZFINID:ZDB-GENE-030805-5 Length:519 Species:Danio rerio


Alignment Length:407 Identity:133/407 - (32%)
Similarity:194/407 - (47%) Gaps:99/407 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PRHVIMPPRVTLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLL 106
            |...::.....:..:.:.|:...||.:|:|:|||||:||:||||||:.::.:.|::..::|.:|:
Zfish   152 PNKTLVKKNPKVANINVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKIFGMDPMADYMLLM 216

  Fly   107 EMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDN 169
            :.:|:.|.||:  |..|.|:.||.|:|.:|.|::.||||||.||.|..|.:.|:|:|||||.||:
Zfish   217 DFLPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDD 281

  Fly   170 SGHIVLASMHKYQPRLHVIRT---ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNP 231
            :|||:|.|||:||||.||:..   .|..:......:.|||.||.|.|||||||.|||:|||.:||
Zfish   282 NGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENYKTFVFEETRFTAVTAYQNHRITQLKIASNP 346

  Fly   232 FAKGFRE------------------TGQSRCKRKMSSSPTGE-----------DQDQSPSLSHSQ 267
            ||||||:                  :..:|.:..|||.|...           |:|.|.:..||.
Zfish   347 FAKGFRDCDPEDWPRNHRPGSLQIMSAFARTRNPMSSPPQQNGTEKEDSRREYDRDPSGNPLHSD 411

  Fly   268 SQSE---SDMSPTKGGGETAGGTSSIGDSDGPQI--KRLRSNGSACSLSSSLDDQSVPGASSLAL 327
            ...:   ..:||..   ...||..::..:.||:.  ..||.:|..                    
Zfish   412 PTHQLMSRVLSPAL---PVLGGLHAVPLTAGPRSPPHELRLDGHP-------------------- 453

  Fly   328 GSPPPHLHSHSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMY 392
             .||..||.|.:.:|                              .||   .|..|...:.|| |
Zfish   454 -QPPDTLHHHPYKYP------------------------------ATY---EHYLGAKTRPSP-Y 483

  Fly   393 PPAAMLQAGLGPHPGLN 409
            |..::  .|.|.||.:|
Zfish   484 PSPSI--RGHGYHPHMN 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 94/209 (45%)
tbx1XP_005168668.1 TBOX 165..355 CDD:238106 94/189 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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