DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx1

DIOPT Version :10

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_005168668.1 Gene:tbx1 / 368206 ZFINID:ZDB-GENE-030805-5 Length:519 Species:Danio rerio


Alignment Length:407 Identity:133/407 - (32%)
Similarity:194/407 - (47%) Gaps:99/407 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PRHVIMPPRVTLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLL 106
            |...::.....:..:.:.|:...||.:|:|:|||||:||:||||||:.::.:.|::..::|.:|:
Zfish   152 PNKTLVKKNPKVANINVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKIFGMDPMADYMLLM 216

  Fly   107 EMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDN 169
            :.:|:.|.||:  |..|.|:.||.|:|.:|.|::.||||||.||.|..|.:.|:|:|||||.||:
Zfish   217 DFLPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDD 281

  Fly   170 SGHIVLASMHKYQPRLHVIRT---ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNP 231
            :|||:|.|||:||||.||:..   .|..:......:.|||.||.|.|||||||.|||:|||.:||
Zfish   282 NGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENYKTFVFEETRFTAVTAYQNHRITQLKIASNP 346

  Fly   232 FAKGFRE------------------TGQSRCKRKMSSSPTGE-----------DQDQSPSLSHSQ 267
            ||||||:                  :..:|.:..|||.|...           |:|.|.:..||.
Zfish   347 FAKGFRDCDPEDWPRNHRPGSLQIMSAFARTRNPMSSPPQQNGTEKEDSRREYDRDPSGNPLHSD 411

  Fly   268 SQSE---SDMSPTKGGGETAGGTSSIGDSDGPQI--KRLRSNGSACSLSSSLDDQSVPGASSLAL 327
            ...:   ..:||..   ...||..::..:.||:.  ..||.:|..                    
Zfish   412 PTHQLMSRVLSPAL---PVLGGLHAVPLTAGPRSPPHELRLDGHP-------------------- 453

  Fly   328 GSPPPHLHSHSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMY 392
             .||..||.|.:.:|                              .||   .|..|...:.|| |
Zfish   454 -QPPDTLHHHPYKYP------------------------------ATY---EHYLGAKTRPSP-Y 483

  Fly   393 PPAAMLQAGLGPHPGLN 409
            |..::  .|.|.||.:|
Zfish   484 PSPSI--RGHGYHPHMN 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 T-box_Drosocross-like 56..238 CDD:410332 93/186 (50%)
tbx1XP_005168668.1 T-box_TBX1_10-like 165..353 CDD:410313 93/187 (50%)

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