DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx6

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_038941217.1 Gene:Tbx6 / 365371 RGDID:1307716 Length:463 Species:Rattus norvegicus


Alignment Length:456 Identity:176/456 - (38%)
Similarity:226/456 - (49%) Gaps:107/456 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PDPFPPMLPIPM-PRHVIMPPRV--TLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRL 91
            |.|. |:||..: |.....||..  :||||.::|:|.:|||:|..:||||||||:||||||:.|:
  Rat    63 PPPL-PLLPSALGPETAPPPPEALHSLPGVSLSLENQELWKEFSAVGTEMIITKAGRRMFPACRV 126

  Fly    92 SVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPIL 156
            ||:||:.|:.|..||::||:...||::.|..|.|:|.|||:.|.|:|:|||||||||||..||:.
  Rat   127 SVTGLDPEARYLFLLDVVPVDGARYRWQGQHWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVS 191

  Fly   157 FNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDR 221
            |::|||||:|||..||::|.||||||||:|::|...|....|....:|.|.||.|::||||||.|
  Rat   192 FHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRATQLCSQHWGGVASFRFPETTFISVTAYQNPR 256

  Fly   222 ITKLKIDNNPFAKGFRETGQ-------SRCKRKM-SSSPTGEDQ----------DQSPSLSHSQS 268
            ||:|||..|||||||||.|:       :|.|||: ...|...:.          ...|:|....|
  Rat   257 ITQLKIAANPFAKGFRENGRNCKRERDARVKRKLRGPEPVATEACGSGGECCPGGMGPNLRKGAS 321

  Fly   269 QSE---SDMSPTKGG--GETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGASSLALG 328
            .|:   |..|.|.||  ..|.||  .|.||| |:              .:...|....||:...|
  Rat   322 PSQPVLSVSSDTPGGPCDSTLGG--DIRDSD-PE--------------PAPTPQEAASASAPPCG 369

  Fly   329 SPPPH---LHS---HSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAI- 386
            .|...   ||.   |..|..|.||:.|.               |...|.     |||..|..|. 
  Rat   370 GPSAEAYLLHPAAFHGAPSHLPARTPSF---------------PEAPDP-----GRPAPYSAAFL 414

  Fly   387 -----------QASPMYPPAAMLQAGLGPH--PGLNLP---PGVSGADLISDESGAEELELDVGS 435
                       |.:|...|.|       ||  .|...|   ||..|             .||:||
  Rat   415 ELQPGPGSSAYQTTPSVTPFA-------PHFIQGAPFPLPYPGPGG-------------YLDMGS 459

  Fly   436 E 436
            :
  Rat   460 K 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 109/193 (56%)
Tbx6XP_038941217.1 T-box_TBX6 91..273 CDD:410322 105/181 (58%)
PHA03247 <293..453 CDD:223021 48/203 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335198
Domainoid 1 1.000 240 1.000 Domainoid score I2183
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I2978
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - otm44536
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.890

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