DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx20

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_006242782.1 Gene:Tbx20 / 315497 RGDID:1309396 Length:446 Species:Rattus norvegicus


Alignment Length:399 Identity:151/399 - (37%)
Similarity:205/399 - (51%) Gaps:81/399 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DPFPPMLPIPMPRHVIMPPRVTLPGVEM-----TLQNDDLWKQFHQIGTEMIITKSGRRMFPSMR 90
            :|..|..||             :|..||     :|:..:||.:||::|||||||||||||||::|
  Rat    83 EPLIPTTPI-------------IPSEEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTIR 134

  Fly    91 LSVSGLEDESNYCVLLEMVPIGDCRYKFS--GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQ 153
            :|.||::.|:.|.||:::||:.:.||:::  .|.|:.||.|:|..|.|:|:|||||.||.....|
  Rat   135 VSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQ 199

  Fly   154 PILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIR----TADLAQIPWAPQQAFVFAETEFVAV 214
            .:.|.|||||||.||..|||:|.||||||||:|:|:    ||.|..:.....:.|:|.||.|.||
  Rat   200 MVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAV 264

  Fly   215 TAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKG 279
            |||||..|||||||:||||||||:          ||..|..:::...||....|.:.   ||.:.
  Rat   265 TAYQNQLITKLKIDSNPFAKGFRD----------SSRLTDIERESVESLIQKHSYAR---SPIRT 316

  Fly   280 GGETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQ 344
            .||.        |..|.:.:...:.|||.:.|.:|...|...:||...|        ..||.||.
  Rat   317 YGEE--------DVLGEESQTTPNRGSAFTTSDNLSLSSWVSSSSSFPG--------FQHPQPLT 365

  Fly   345 ARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQ-----ASPMYPPA-AMLQAGLG 403
            |...|:.          |:..|.           ||...|::.     ..|:.|.| |....|.|
  Rat   366 ALGTSTA----------SIATPI-----------PHPIQGSLPPYSRLGMPLTPSAIASSMQGSG 409

  Fly   404 P-HPGLNLP 411
            | .|..::|
  Rat   410 PTFPSFHMP 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 105/197 (53%)
Tbx20XP_006242782.1 TBOX 99..291 CDD:238106 104/201 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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