DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and bi

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:610 Identity:184/610 - (30%)
Similarity:267/610 - (43%) Gaps:179/610 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DLRMQQHIAHEIYRQQIMQRIPDPFPPMLPI----PMPRHVIMPPRVTLPGVEMTLQNDDLWKQF 69
            |:.:...:||:::            |.|.|:    |....|:..|:|||.|       .|||::|
  Fly   296 DVVLASAVAHQLH------------PAMRPLRALQPEDDGVVDDPKVTLEG-------KDLWEKF 341

  Fly    70 HQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSP 134
            |::||||:||||||:|||.|:..||||:.::.|.:||::|...|.||||..|:|:.||.|:|:.|
  Fly   342 HKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMP 406

  Fly   135 QRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHI---VLASMHKYQPRLHVIRTADLAQI 196
            :|||:|||||.||..|..:.:.|:|:|||||..|..|.:   :|.||||||||.|::|..|:.::
  Fly   407 KRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDILKL 471

  Fly   197 PWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMS-SSPTGEDQD-- 258
            |::..:.:||.||||:|||||||::||:|||||||||||||:||..:.::|.: .|..|.|.|  
  Fly   472 PYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKL 536

  Fly   259 -----------------------------------------------QSP--SLSHSQSQSESDM 274
                                                           |||  .||||..|..:..
  Fly   537 NPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQ 601

  Fly   275 SPT-------------KGGGETAGGTSSIGDSDGPQIKRLRSNG--------SACSLS------- 311
            ...             .|..|.|...::...::....:||:::.        |:||.|       
  Fly   602 HSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGG 666

  Fly   312 -----SSLDDQSVPGASSLALGS---------------------PPPHLHSHSHPHPLQA----- 345
                 |:...:...||::.|..:                     |.|||..:.:||.|..     
  Fly   667 AFRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLG 731

  Fly   346 ---RSASSVFMQHFQQNMQSLLRPSLVDLACTY---FGRPHEYGGAIQASPM-------YPPAAM 397
               ..|::..|.....|...|....|. ||..:   ||..:...|....||:       :.|.: 
  Fly   732 LLHNPAAAAAMSPAGLNPGLLFNAQLA-LAAQHPALFGHAYAAAGHTPVSPLQGLKSHRFSPYS- 794

  Fly   398 LQAGLGP-----HPGLNL-----PPGVSGADLISDESGAEELELDVGSETSTLEQSTQEQPL-EQ 451
            |...||.     .||.|.     |||..|..|     |...:|    :...:|..|.:.:|. ..
  Fly   795 LPGSLGSAFDAVTPGSNANRSGDPPGGGGGGL-----GGGVVE----NGPRSLSSSPRPRPASHS 850

  Fly   452 PSTRSKGFS-------ISAILGGGS 469
            |.||....|       :....|||:
  Fly   851 PPTRPISMSPTTPPSLMKQPRGGGA 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 103/189 (54%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 6/33 (18%)
T-box 330..513 CDD:279278 103/189 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439056
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.