DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx19

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001381159.1 Gene:Tbx19 / 304935 RGDID:1310145 Length:448 Species:Rattus norvegicus


Alignment Length:432 Identity:136/432 - (31%)
Similarity:199/432 - (46%) Gaps:91/432 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSG 120
            :::.|::..||::|.::..|||:||:||||||.:::||:||:..:.|.:||:.||....|:|:..
  Rat    41 LQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTGLDPNAMYSLLLDFVPTDSHRWKYVN 105

  Fly   121 SQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRL 185
            .:|||||..|..|...:|:|||||..||||...||.|:||||||. |...|.|:|.|:|||:|::
  Rat   106 GEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLTNK-LSGGGQIMLNSLHKYEPQV 169

  Fly   186 HVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSS 250
            |::|.....::    .....|.||:|:|||||||:.||.|||..|||||.|.:..:   :..:..
  Rat   170 HIVRVGGAHRM----VMNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKE---RNHLKE 227

  Fly   251 SPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLD 315
            .|....:.|..:.||                  .||. .:.:.||           .|:..|:..
  Rat   228 IPEAVSESQHVTYSH------------------LGGW-ILSNPDG-----------MCTTGSANY 262

  Fly   316 DQSVPGASSLALGSPPPHL-HSHSH----------PHPL----QARSASSVFMQHFQQNMQSLLR 365
            ..:.|      |..|.||. |...|          |:|.    :..|.|...::....|:|....
  Rat   263 QYATP------LPLPAPHTRHGCEHYAGLRGHRQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSG 321

  Fly   366 P-SLVDLACTYFGRPHEYGGAIQ----ASPMYPPAAMLQAGLGPHPGL------NLPPGVSGADL 419
            | |...|.    ..||  ||.:.    :.|:.|       |..|:|.|      ...|..||:::
  Rat   322 PESWTSLP----SAPH--GGILSVPHTSGPINP-------GPSPYPCLWTISNGGGGPVASGSEV 373

  Fly   420 ISDESGAEELELDVGSETSTLEQSTQEQPLEQPSTRSKGFSI 461
            .:..||...|    ||.|.|...|.    |...:|.|.|..:
  Rat   374 HASASGTFLL----GSPTVTSPSSL----LPTQATTSAGVEV 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 85/185 (46%)
Tbx19NP_001381159.1 T-box_TBX19-like 36..218 CDD:410327 85/181 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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