DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx5

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001009964.1 Gene:Tbx5 / 304514 RGDID:1305702 Length:517 Species:Rattus norvegicus


Alignment Length:390 Identity:146/390 - (37%)
Similarity:201/390 - (51%) Gaps:82/390 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYK 117
            :.|:::.|...:||.:||::||||||||:||:||||.::.|:||..::.|.:|:::||..|.|||
  Rat    51 MEGIKVFLHERELWLKFHEVGTEMIITKAGRQMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYK 115

  Fly   118 FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQ 182
            |:.::|...|.|||..|.|:|:|||||||||||..|.:.|.|:|||||.||..|||:|.||||||
  Rat   116 FADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQ 180

  Fly   183 PRLHVIRTADLAQIPWAPQQAF---VFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRC 244
            ||||::: ||......:...||   ||.||.|:|||:|||.:||:|||:|||||||||       
  Rat   181 PRLHIVK-ADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFR------- 237

  Fly   245 KRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSACS 309
                     |.|..:...:|..:|: |..:.|...........|...           |...|.|
  Rat   238 ---------GSDDLELHRMSRMRSK-EYPVVPRSTVRHKVANHSPFS-----------SETRALS 281

  Fly   310 LSSSLDDQ-----SVPGASSLALGSPPPHLHSHSHPHPLQARSASSVF------------MQHFQ 357
            .||:|..|     .|.|.|...|  |||      :|:|| |:..|.::            .:|..
  Rat   282 TSSNLGSQYQCENGVSGPSQDLL--PPP------NPYPL-AQEHSQIYHCTKRKDEECSSTEHPY 337

  Fly   358 QNMQSLLRPSLVDLACTYF--GRPHEYG--------GAIQASPMY----PPAAMLQAGLGPHPGL 408
            :.......||..|   |::  |.|.:.|        .|.:.:.||    ||:.       |.|.|
  Rat   338 KKPYMETSPSEED---TFYRSGYPQQQGLSTSYRTESAQRQACMYASSAPPSE-------PVPSL 392

  Fly   409  408
              Rat   393  392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 104/189 (55%)
Tbx5NP_001009964.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
TBOX 53..241 CDD:238106 105/204 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..313 18/62 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..369 8/40 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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