DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx5

DIOPT Version :10

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001009964.1 Gene:Tbx5 / 304514 RGDID:1305702 Length:517 Species:Rattus norvegicus


Alignment Length:390 Identity:146/390 - (37%)
Similarity:201/390 - (51%) Gaps:82/390 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYK 117
            :.|:::.|...:||.:||::||||||||:||:||||.::.|:||..::.|.:|:::||..|.|||
  Rat    51 MEGIKVFLHERELWLKFHEVGTEMIITKAGRQMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYK 115

  Fly   118 FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQ 182
            |:.::|...|.|||..|.|:|:|||||||||||..|.:.|.|:|||||.||..|||:|.||||||
  Rat   116 FADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQ 180

  Fly   183 PRLHVIRTADLAQIPWAPQQAF---VFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRC 244
            ||||::: ||......:...||   ||.||.|:|||:|||.:||:|||:|||||||||       
  Rat   181 PRLHIVK-ADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFR------- 237

  Fly   245 KRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSACS 309
                     |.|..:...:|..:|: |..:.|...........|...           |...|.|
  Rat   238 ---------GSDDLELHRMSRMRSK-EYPVVPRSTVRHKVANHSPFS-----------SETRALS 281

  Fly   310 LSSSLDDQ-----SVPGASSLALGSPPPHLHSHSHPHPLQARSASSVF------------MQHFQ 357
            .||:|..|     .|.|.|...|  |||      :|:|| |:..|.::            .:|..
  Rat   282 TSSNLGSQYQCENGVSGPSQDLL--PPP------NPYPL-AQEHSQIYHCTKRKDEECSSTEHPY 337

  Fly   358 QNMQSLLRPSLVDLACTYF--GRPHEYG--------GAIQASPMY----PPAAMLQAGLGPHPGL 408
            :.......||..|   |::  |.|.:.|        .|.:.:.||    ||:.       |.|.|
  Rat   338 KKPYMETSPSEED---TFYRSGYPQQQGLSTSYRTESAQRQACMYASSAPPSE-------PVPSL 392

  Fly   409  408
              Rat   393  392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 T-box_Drosocross-like 56..238 CDD:410332 102/184 (55%)
Tbx5NP_001009964.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
T-box_TBX4_5-like 54..238 CDD:410315 103/200 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..313 18/62 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..369 8/40 (20%)
Blue background indicates that the domain is not in the aligned region.

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