DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx16

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_571133.1 Gene:tbx16 / 30264 ZFINID:ZDB-GENE-990615-5 Length:470 Species:Danio rerio


Alignment Length:495 Identity:163/495 - (32%)
Similarity:214/495 - (43%) Gaps:165/495 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 MQRIPDPFPPMLPIPMPRHVIMPPRVTLPG---------VEMTLQNDDLWKQFHQIGTEMIITKS 81
            ||.|.|         :..:..:||..::||         :.|||::.:||:.||:|||||||||.
Zfish     1 MQAIRD---------LKHNFSLPPPPSMPGAGDSYHQGNIRMTLEDPELWRSFHEIGTEMIITKP 56

  Fly    82 GRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPAT 146
            ||||||..::|:|||...:.|.:|::|||....|||::..:|..||.||||.|.|.||||||||.
Zfish    57 GRRMFPHCKISLSGLVPYAKYILLVDMVPEDGLRYKWNKDKWEVAGKAEPQPPYRTYLHPDSPAP 121

  Fly   147 GAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWAPQQAFVFAETEF 211
            |:||..||:.|.|:|||||.||..|||:|.|||:|.||.|:::..||..:.|:..|.|.|.||.|
Zfish   122 GSHWMKQPVSFLKLKLTNNALDQHGHIILHSMHRYHPRFHIVQADDLYSVRWSVFQTFTFPETSF 186

  Fly   212 VAVTAYQNDRITKLKIDNNPFAKGFRETGQS-------------RCKRKMS-SSPTGEDQDQSPS 262
            .|||||||.:|||||||:||||||||:.|.:             |..:||| .|..|..||..||
Zfish   187 TAVTAYQNTKITKLKIDHNPFAKGFRDEGTNSKRRANRNLPDPERVAKKMSKDSEHGSPQDVQPS 251

  Fly   263 LS------------------------------------------------HSQSQ---------- 269
            ..                                                :|..|          
Zfish   252 SCEALDDEHAGRKELEVKAERYSPWGGACDRDSGHALRPESPLGSDHRDVYSSEQLVPGQNTYQP 316

  Fly   270 ---SESDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPP 331
               .|...||:.....:.||:|:.|.:..|..:           |..||..:||...|.:..|..
Zfish   317 YRFHEYGKSPSPSSSSSVGGSSACGSAGRPSFE-----------SRVLDVATVPDTDSSSKPSSA 370

  Fly   332 PHLHSHSHP-------------------------HPLQARSASSVFMQHFQQNMQSLLRPSLVDL 371
            |......||                         |||.:         |:... |||        
Zfish   371 PEFSLPPHPSAGHQEYAGVLNMAITQAKPGMLGTHPLYS---------HYSTE-QSL-------- 417

  Fly   372 ACTYFGRPHEYGGAIQASPMYPPAAMLQAGLGPHPGLNLP 411
                    .::.||  |:..|||.        |.|..:||
Zfish   418 --------GQWSGA--AASQYPPP--------PPPHHHLP 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 109/195 (56%)
tbx16NP_571133.1 TBOX 30..217 CDD:238106 108/186 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 254 1.000 Inparanoid score I3166
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.960

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