DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx15

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001382004.1 Gene:Tbx15 / 295315 RGDID:1308094 Length:602 Species:Rattus norvegicus


Alignment Length:494 Identity:166/494 - (33%)
Similarity:232/494 - (46%) Gaps:91/494 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYK--F 118
            :::.||..||||:||.|||||||||:||||||:||:.::||:....|.:.:::||:.:.||:  :
  Rat   113 IQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNKRYRYVY 177

  Fly   119 SGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQP 183
            ..|:|:.||.|:...|.|:|:||||.|:|..|..|.:.|:|:|||||.||:.|||:|.|||||||
  Rat   178 HSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGHIILHSMHKYQP 242

  Fly   184 RLHVIR---TADLAQIPWAP----QQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQ 241
            |:||||   ::||:.....|    .:.|.|.||.|..||||||.:||:||||.||||||||::|:
  Rat   243 RVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGR 307

  Fly   242 SR--------------------------CKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGG 280
            :|                          ..:|.....||.....|.:.:.|.|.|...:||:...
  Rat   308 NRTGLEAIMETYAFWRPPVRTLTFEDFTTMQKQQGGSTGTSPSTSSTGTPSPSASSHLLSPSCSP 372

  Fly   281 G--ETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGAS-------------------- 323
            .  ..|..|.::|..:........|:...|:.|:....||.||.|                    
  Rat   373 PTFHLAPNTFNVGCRESQLCNLNLSDYPPCARSNMAALQSYPGLSDSGYNRLQSGTASATQPSET 437

  Fly   324 -------SLALGSP-PPHLHSHSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPH 380
                   ||..|.| ||.|.|:|.......:..|....| ||..||:       ..|.:....||
  Rat   438 FMPQRTPSLISGIPTPPSLPSNSKMEAYGGQLGSFPTSQ-FQYVMQA-------GNAASSSSSPH 494

  Fly   381 EYGG------AIQASPMYPPAAMLQAGLGPHPGLNLPP---GVSGADLI--SDESGA--EELELD 432
            .:||      :..|..::.|..:........|.|...|   ..|.:.|:  |..:||  |...|.
  Rat   495 MFGGSHMQQSSYNAFSLHNPYNLYGYNFPTSPRLAASPEKLSASQSTLLCSSPSNGAFGERQYLP 559

  Fly   433 VGSETST--LEQSTQEQPLEQPSTRSKGFSISAILGGGS 469
            .|.|.|.  :..||..|   |.:....|....|:.|..|
  Rat   560 TGMEHSVHMISPSTNNQ---QATNTCDGRQYGAVPGSSS 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 102/194 (53%)
Tbx15NP_001382004.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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