DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbxt

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_017444362.1 Gene:Tbxt / 292301 RGDID:1310141 Length:437 Species:Rattus norvegicus


Alignment Length:393 Identity:131/393 - (33%)
Similarity:186/393 - (47%) Gaps:86/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWV 124
            |:..:||.:|.::..|||:||:||||||.::::||||:..:.|..||:.|...:.|:|:...:||
  Rat    46 LEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWV 110

  Fly   125 PAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIR 189
            |.|..|||:|..:|:|||||..||||...|:.|:||||||. |:..|.|:|.|:|||:||:|::|
  Rat   111 PGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIMLNSLHKYEPRIHIVR 174

  Fly   190 TADLAQIPWAPQQ---AFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSSS 251
            ..       .||:   :..|.||:|:|||||||:.||.|||..|||||.|.:..:....:.:...
  Rat   175 VG-------GPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNDHKDVMEE 232

  Fly   252 PTGEDQDQSPSLSHSQS---QSESDMSPTKGGGETAGGTSSIGDSDG----PQIKRLRS------ 303
            |   ...|.|..|.|..   .....:.|........||:.|:..:.|    |.::..||      
  Rat   233 P---GDCQQPGYSQSGGWLVPGAGTLCPPASSHPQFGGSLSLPSTHGCERYPTLRNHRSSPYPSP 294

  Fly   304 ------------NGSAC-SLSSSLDDQS---VPGASSLA----LGSPP------PHLHSHSH--- 339
                        |.||| |:..|.|:.|   ||..:|:.    ..|||      |.|.|.|:   
  Rat   295 YAHRNNSPTYADNSSACLSMLQSHDNWSSLGVPAHTSMLPVSHNASPPTGSSQYPSLWSVSNGTI 359

  Fly   340 -PHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYG----------GAIQASPMYP 393
             |....|..::.:..|.|:                   |.|..|.          .:...||||.
  Rat   360 TPGSQTAGVSNGLGAQFFR-------------------GSPAHYAPLTHTVSAATSSSSGSPMYE 405

  Fly   394 PAA 396
            .||
  Rat   406 GAA 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 87/184 (47%)
TbxtXP_017444362.1 TBOX 42..224 CDD:214656 87/185 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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