DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx6

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_035668.2 Gene:Tbx6 / 21389 MGIID:102539 Length:436 Species:Mus musculus


Alignment Length:420 Identity:169/420 - (40%)
Similarity:229/420 - (54%) Gaps:71/420 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PMLPIPM-PRHVIMPPRV--TLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGL 96
            |:||..: |.....||..  :||||.::|:|.:|||:|..:||||||||:||||||:.|:||:||
Mouse    67 PLLPSALGPETAPPPPEALHSLPGVSLSLENQELWKEFSAVGTEMIITKAGRRMFPACRVSVTGL 131

  Fly    97 EDESNYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVK 161
            :.|:.|..||::||:...||::.|..|.|:|.|||:.|.|:|:|||||||||||..||:.|::||
Mouse   132 DPEARYLFLLDVVPVDGARYRWQGQHWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFHRVK 196

  Fly   162 LTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLK 226
            |||:|||..||::|.||||||||:|::|...|....|....:|.|.||.|::||||||.|||:||
Mouse   197 LTNSTLDPHGHLILHSMHKYQPRIHLVRATQLCSQHWGGVASFRFPETTFISVTAYQNPRITQLK 261

  Fly   227 IDNNPFAKGFRETGQSRCKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGG--TSS 289
            |..|||||||||.|:: |||:..:....:.:...|..:.:           .|.|:|.||  .|:
Mouse   262 IAANPFAKGFRENGRN-CKRERDARVKRKLRGPEPVATEA-----------CGSGDTPGGPCDST 314

  Fly   290 IG----DSDGPQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPH---LHS---HSHPHPLQ 344
            :|    |||..|               :...|....||:...|.|...   ||.   |..|..|.
Mouse   315 LGGDIRDSDPEQ---------------APTPQEAASASAPPCGGPSAEAYLLHPAAFHGAPSHLP 364

  Fly   345 ARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAA--MLQAGLGPHPG 407
            ||:.|  |.:.......:....:.:||      :|...|.|.||:|..|..|  .:|.  ||.| 
Mouse   365 ARTPS--FAEAPDPGRPAPYSAAFLDL------QPGPGGSAYQAAPSVPSFAPHFIQG--GPFP- 418

  Fly   408 LNLP-PGVSGADLISDESGAEELELDVGSE 436
              || ||..|             .||:||:
Mouse   419 --LPYPGPGG-------------YLDMGSK 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 109/186 (59%)
Tbx6NP_035668.2 TBOX 90..277 CDD:238106 109/186 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831461
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3037
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - otm43723
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6331
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.880

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