DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and Tbx2

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_033350.2 Gene:Tbx2 / 21385 MGIID:98494 Length:711 Species:Mus musculus


Alignment Length:553 Identity:175/553 - (31%)
Similarity:247/553 - (44%) Gaps:146/553 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGS 121
            ::||:..:||.|||::||||:||||||||||..::.||||:.::.|.:|:::|...||||||..|
Mouse   106 KVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNS 170

  Fly   122 QWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLH 186
            :|:.||.|:|:.|:|||:||||||||..|.|:|:.|:|:|||||..|..|..:|.||||||||.|
Mouse   171 RWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFH 235

  Fly   187 VIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSR-------- 243
            ::|..|:.::|::..:.:||.||:|:||||||||:||:|||||||||||||:||..|        
Mouse   236 IVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLT 300

  Fly   244 ----------CK------------------RKMSSSP---------------------------- 252
                      ||                  |:...||                            
Mouse   301 LPTLRLYEEHCKPERDGAESDASSCDPPPAREPPPSPSAAPSPLRLHRARAEEKPGAADSDPEPE 365

  Fly   253 -TGEDQDQSPSLSHSQSQSES-------------------DMSPTKGGGETAGGTSSIGDSDGPQ 297
             |||::..:| |..|.|:..|                   ...||:|||:......|: :.:.|:
Mouse   366 RTGEERSAAP-LGRSPSRDASPARLTEPERSRERRSPERCSKEPTEGGGDGPFSLRSL-EKERPE 428

  Fly   298 IKRLRSNG----------SACSLSSSLDDQSVPGAS---SLALGSPPPHLHSHSHPHPLQARSAS 349
            .:| :..|          |...|....|..|..||.   .||..|   |||......||.|....
Mouse   429 ARR-KDEGRKDVGEGKEPSLAPLVVQTDSASPLGAGHLPGLAFSS---HLHGQQFFGPLGAGQPL 489

  Fly   350 SVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGA-------IQASPMYPPAA----------- 396
            .:....|.....:.....:..|..:..|.....|||       :.|..:.|.|:           
Mouse   490 FLHPGQFAMGPGAFSAMGMGHLLASVAGGSGSSGGAGPGTAAGLDAGGLGPAASAASTAAPFPFH 554

  Fly   397 ----MLQA---------GLGPHP---------GLNLPPGVSGADLISDESGAEELELDVGSETST 439
                ||.:         ||.|:|         ..:..|..|.|...:..:|:......:||....
Mouse   555 LSQHMLASQGIPMPTFGGLFPYPYTYMAAAAAAASALPATSAAAAAAAAAGSLSRSPFLGSARPR 619

  Fly   440 LEQSTQEQPLEQPSTRS---KGFSISAILGGGS 469
            |..|..:.|:..|.:.|   .|.:.....||.|
Mouse   620 LRFSPYQIPVTIPPSTSLLTTGLAAEGSKGGNS 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 107/184 (58%)
Tbx2NP_033350.2 TBOX 104..289 CDD:238106 105/182 (58%)
TBX 305..382 CDD:204975 11/77 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..449 21/138 (15%)
Repression domain 1 (RD1). /evidence=ECO:0000250 518..602 15/83 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 640..687 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.