DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and Tbx1

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001360867.1 Gene:Tbx1 / 21380 MGIID:98493 Length:529 Species:Mus musculus


Alignment Length:450 Identity:142/450 - (31%)
Similarity:202/450 - (44%) Gaps:149/450 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DPFPPMLPIPMPRHVIMPPRVTLPG---------------------------------------- 55
            |||.|..| |.||:   .|...:||                                        
Mouse    79 DPFGPREP-PPPRY---DPCAAVPGAPGPPPPRAYPFAPAPGAAGSSAAESEGPGASRAAAVKAP 139

  Fly    56 ---------VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPI 111
                     |.:.|:...||.:|:|:|||||:||:||||||:.::.:.|::..::|.:|::.||:
Mouse   140 VKKNPKVASVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPV 204

  Fly   112 GDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIV 174
            .|.||:  |..|.|:.||.|:|.:|.|::.||||||.||.|..|.:.|:|:|||||.||::|||:
Mouse   205 DDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHII 269

  Fly   175 LASMHKYQPRLHVIRT---ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGF 236
            |.|||:||||.||:..   .|..:......:.|||.||.|.|||||||.|||:|||.:|||||||
Mouse   270 LNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGF 334

  Fly   237 RE------------------TGQSRCKRKMSS--SPTGEDQDQSPSLSHSQSQSESDMSPTKGGG 281
            |:                  :..:|.:..::|  .|.|.|:|.      ::::.|.|..      
Mouse   335 RDCDPEDWPRNHRPGALPLVSAFARSRNPVASPTQPNGSDKDA------AEARREFDRD------ 387

  Fly   282 ETAGGTSSIGDSDGPQ--IKRLRS-------------NGSACSLSSSLDD--QSVPGASS----- 324
               .|.:::||:..|.  :.|:.|             .||....|....|  ...||||.     
Mouse   388 ---SGPAALGDATHPPQLLARVLSPALPGPGGLVPLPGGSGGRHSPPHADLRLEAPGASEPLHHH 449

  Fly   325 ------------LALGSPP--------------PHLHSHSHPH--------PLQARSASS 350
                        |...|.|              ||.|.|:|||        |..|.:|::
Mouse   450 PYKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHAHPHHHHHPAVNPAAAAAAAA 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 97/258 (38%)
Tbx1NP_001360867.1 T-box 151..336 CDD:366363 94/184 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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