DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx6

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_705952.2 Gene:tbx6 / 192294 ZFINID:ZDB-GENE-020416-5 Length:874 Species:Danio rerio


Alignment Length:550 Identity:179/550 - (32%)
Similarity:245/550 - (44%) Gaps:140/550 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QRIPD--------PFPP----MLPIPMPRHVIMP------PRVTLPGVEMTLQNDDLWKQFHQIG 73
            ||:.|        |..|    |....:|..::.|      |......|.|.|:|..|||||..:|
Zfish    15 QRLSDCYYRDRDVPLYPSTCEMAARALPPALLKPHANTDSPATPQDSVRMELENAGLWKQFSTVG 79

  Fly    74 TEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMY 138
            ||||:||.||||||.:|:.:|||.....|.:||::||:...||:|..:.|...||||.:.|.|::
Zfish    80 TEMIVTKKGRRMFPQLRVKLSGLNPSLRYILLLDIVPVDSSRYRFQDNSWQVVGGAEARLPDRVF 144

  Fly   139 LHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWA-PQQ 202
            :||||||||.|||.:.|.|::.||||||||..|:|:|.|:|:||||:|||...|:  :.|. .|.
Zfish   145 IHPDSPATGEHWQNRTISFHRAKLTNNTLDAQGYIILHSLHRYQPRVHVIEARDV--LMWGRTQH 207

  Fly   203 AFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETG-------QSRCKRKMSSS--------- 251
            :|.|.||:|:.||||||::||:|||::|||||||||.|       ::|.|||::||         
Zfish   208 SFTFPETQFITVTAYQNNKITELKINSNPFAKGFRENGMNCKKQREARLKRKITSSQEECLDIES 272

  Fly   252 ------------------------------------------PTGEDQDQS------------PS 262
                                                      |...|.||:            ||
Zfish   273 CDPCDSTELLPQSVDLPSSALTIMNTALPITDSGFHTEVSSHPDQTDSDQTLVLEQAFLTSEMPS 337

  Fly   263 LSHSQSQSESD-------MSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSACSL-----SSSLD 315
            ...||.|:.|:       |..|....:.:|.|||.   ..||:....|...:.|:     |:...
Zfish   338 SMESQQQTTSETNVNNALMDETGQMMDLSGYTSSF---PTPQLSSHTSVPQSSSMYSVVSSTQSS 399

  Fly   316 DQSVPGASSLALGSPPPHLHSHSHPHPLQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPH 380
            |..:|.|||:            |.||.:.|.| |....::...|..:.:..|...|:.:|....|
Zfish   400 DLELPQASSI------------SSPHSMPAYS-SIPSAEYPGVNSSTAMPASTTSLSDSYPSISH 451

  Fly   381 EYGGAIQASPMYP---PAAMLQAGLGPHPGLNLP----PGVSGADLISDESGAEELELDVG---- 434
            .....:..|..|.   |....|..|.||...|.|    |...|..|..| ||..::: |.|    
Zfish   452 STSSHLLQSSSYHSLLPTDQSQDNLSPHTPTNPPFQSIPACQGTRLTID-SGQNQVD-DGGLSSA 514

  Fly   435 -SETSTLEQSTQE-------QPLEQPSTRS 456
             :.|..:...||.       ||...|...|
Zfish   515 NATTPAVPNPTQTAFPFPPVQPNNDPDPTS 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 103/194 (53%)
tbx6NP_705952.2 TBOX 62..247 CDD:238106 103/186 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..396 8/34 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..453 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..551 21/80 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..626
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..695
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 720..776
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574470
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6331
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.830

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