DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx-40

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_502852.1 Gene:tbx-40 / 190679 WormBaseID:WBGene00006559 Length:380 Species:Caenorhabditis elegans


Alignment Length:309 Identity:71/309 - (22%)
Similarity:130/309 - (42%) Gaps:53/309 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LQNDDLW-KQFHQIGTEMIITKSG-RRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQ 122
            :..:|.| .|:..:  |||:...| :.:||.:..:::|||::|.|.|||.:....:.||.|...:
 Worm    11 MAEEDRWLTQYPNM--EMIVNNKGPKPIFPELNFNITGLEEKSRYVVLLSIQKFDNIRYGFKNGK 73

  Fly   123 WVPA---GGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNT--LDNSGHIVLASMHKYQ 182
            |.|:   ...:.:...:.:||||....|.....:.|.|:.|::||:.  :|......:.:||||.
 Worm    74 WGPSKVRHATKKEQEIKYFLHPDGTKLGEELMKETIKFDTVRITNHKKFMDKDNVFFVETMHKYV 138

  Fly   183 PRLHVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRI--TKLKIDNNPFAKGFRETGQSRCK 245
            |   |:...::..:..| ..:......:|..||.|..:.|  .|.|...|...:...:.|.   |
 Worm   139 P---VLTVKNITNVESA-NHSMRMEVAQFFPVTVYNQESIGNWKSKFHKNATFENRLDGGN---K 196

  Fly   246 RKMSSSPTGEDQDQSPSLSHSQSQSE---SDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSA 307
            ||.::|      .:.||...|::::|   .|:.......|....:::.|        ||::    
 Worm   197 RKNTNS------REEPSSKRSKNETEIAVLDILQVASQSENYNESTNSG--------RLQN---- 243

  Fly   308 CSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQARSASSVFMQHF 356
             .:|||:  ...|..|           :.:.:||.....:...::.|.|
 Worm   244 -EISSSI--HQFPSTS-----------YQNQYPHAYPTVNTPPIYAQQF 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 49/190 (26%)
tbx-40NP_502852.1 T-box 24..186 CDD:279278 45/167 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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