DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx-39

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_502851.1 Gene:tbx-39 / 190678 WormBaseID:WBGene00006558 Length:396 Species:Caenorhabditis elegans


Alignment Length:375 Identity:86/375 - (22%)
Similarity:152/375 - (40%) Gaps:68/375 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 MTLQNDDLWKQFHQIGTEMIITKSGRRM-FPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGS 121
            :|:..:|.|||::. ..|||:...|.:: ||.:..:::|||::|.|.|||.:....:.||.:...
 Worm     9 VTMAEEDRWKQWYP-NMEMIVNNKGPKLIFPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRNG 72

  Fly   122 QWVPA---GGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNT--LDNSGHIVLASMHKY 181
            :|.|:   ...:.:...:.:||||....|.....:.|.|:.|::||:.  :|......:.:||||
 Worm    73 KWGPSKVRHATKKEQEIKYFLHPDGTKLGKELMKETIKFDTVRITNHKKFMDKDNVFFVETMHKY 137

  Fly   182 QPRLHVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRI--TKLKIDNNPFAKGFRETGQSRC 244
            .|   |:...::..:..| ..:......:|..||.|..:.|  .|.|...|. ..|.|..|.:  
 Worm   138 VP---VLTVKNITNVESA-NHSMRMEVAQFFPVTVYNQESIGNWKSKFHKNS-TYGNRLDGGN-- 195

  Fly   245 KRKMSSSPTGEDQDQSPSLSHSQSQSE---SDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGS 306
            |||      ..|..:..:...|::::|   ||:.......|....:::.|        ||::   
 Worm   196 KRK------NTDSSEERTSKRSKNETEIAVSDILQVASQSENYNESTNSG--------RLQN--- 243

  Fly   307 ACSLSSSLDDQSVPGASSL--------ALGSPP----------PHLHSHSHPHPLQARSASSV-- 351
              .:|||:  ...|..|..        .:.:||          ..:|:...|...|.|.|.:|  
 Worm   244 --EISSSI--HQFPSTSYQNQYPHAYPTVNTPPIYVQQFTALFDEIHNQFDPKTKQNRVAKNVQY 304

  Fly   352 --FMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGG------AIQASPMYP 393
              .:..|..|.:..:..:..|...:.|...:.||.      ..|:|..:|
 Worm   305 LSSVPQFAINQKENIHQNAPDYPVSQFPNQYPYGSYPYYYPYFQSSQQFP 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 52/191 (27%)
tbx-39NP_502851.1 T-box 9..180 CDD:279278 47/175 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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