DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx-42

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_500749.1 Gene:tbx-42 / 190421 WormBaseID:WBGene00022000 Length:308 Species:Caenorhabditis elegans


Alignment Length:229 Identity:56/229 - (24%)
Similarity:104/229 - (45%) Gaps:25/229 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VEMTLQNDDLWKQFHQIGTEMIITKSGRR---MFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYK 117
            :.:.:.|::|||:.:. ..|||  .:.:|   :||.::..:||||:.|.|.::|.:..:.:.||.
 Worm     7 IVVKMSNEELWKERYP-NMEMI--SNSKRITPIFPEIKFKISGLEENSRYVLVLSLEKMDNIRYG 68

  Fly   118 FS-GSQWVPAGGAEPQSPQRM--YLHPDSPATGAHWQAQPILFNKVKLTNN--TLDNSGHIVLAS 177
            .: ..:|.|:...:|:....|  :.||:....|....|:.:.|..|::|.:  ..:......:.:
 Worm    69 INENKEWAPSSARKPKPHHNMKFFFHPEGTKLGKELMAETVEFTSVRITTSEKLSEKENVFYVHT 133

  Fly   178 MHKYQPRLHV--IRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETG 240
            ||||.|.|.:  :.|.::|      ...|.....:|..|:.||...:.:.|.|.|..:. |....
 Worm   134 MHKYVPVLTIRNLTTGEIA------SNIFKMEIAQFFPVSIYQQASMGRWKSDLNKHST-FGNRS 191

  Fly   241 QSRCKRKMSSSPTGEDQDQSPSLSHSQSQSESDM 274
            :...|||     |.:...|.||...|:...:.|:
 Worm   192 EGGIKRK-----TSDAAGQLPSKRSSKKPVKKDV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 47/195 (24%)
tbx-42NP_500749.1 T-box 9..190 CDD:279278 47/190 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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