DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx-2

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001370674.1 Gene:tbx-2 / 175698 WormBaseID:WBGene00006543 Length:423 Species:Caenorhabditis elegans


Alignment Length:453 Identity:165/453 - (36%)
Similarity:235/453 - (51%) Gaps:84/453 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PPMLPIPM------PRHVIMPPR---VT-LPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPS 88
            ||.|...|      |..|..||.   || .|.||  |...:||:||.|.||||:|||||||:||:
 Worm    31 PPNLFFSMLQAGFPPGPVGSPPEDDGVTDDPKVE--LDERELWQQFSQCGTEMVITKSGRRIFPA 93

  Fly    89 MRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQ 153
            .|:.:|||:.:|.|.|::::||..:.||||:.|:|:.||.|:|:.|:.:|:|||||:||.||.::
 Worm    94 YRVKISGLDKKSQYFVMMDLVPADEHRYKFNNSRWMIAGKADPEMPKTLYIHPDSPSTGEHWMSK 158

  Fly   154 PILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQ 218
            ...|:|:|||||..|..|:.:|.|||||||||||:|.||...:.::..:.|||.||||:||||||
 Worm   159 GANFHKLKLTNNISDKHGYTILNSMHKYQPRLHVVRCADRHNLMYSTFRTFVFRETEFIAVTAYQ 223

  Fly   219 NDRITKLKIDNNPFAKGFRETGQSRCKRKMSSSPTGEDQDQSP-----SL-SHSQSQSESDMSPT 277
            |:::|:|||:|||||||||:.|..:.::|........|..|||     || :||...|||:    
 Worm   224 NEKVTELKIENNPFAKGFRDAGAGKREKKRQLHRMNGDATQSPPGKTASLPTHSPHPSESN---- 284

  Fly   278 KGGGETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHP 342
                         .:.|.|.:|:.:...|....:|||..            |..|.|.:|   ||
 Worm   285 -------------SEDDEPTLKKCKPEPSQTPTTSSLST------------STTPTLSAH---HP 321

  Fly   343 LQARSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAAMLQAGLGPHPG 407
            |::               .....|..:|:  .|...|.:.....|.:.::|..:|         .
 Worm   322 LRS---------------PQFCIPPPIDM--MYQNMPMDLLAHWQMATLFPQFSM---------A 360

  Fly   408 LNLPPGVSGADLISDE--SGAEELELDVGSETSTLEQSTQEQPLEQPST---RSKGFSISAIL 465
            ||.|  .:.|.|:|..  ..:.|.:::..||.|. |....|...||.|.   :..||.:..:|
 Worm   361 LNSP--AAAASLLSKHLAKASSECKVEATSEDSE-EAEKPEVKKEQKSVTPPKKGGFDVLDLL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 103/186 (55%)
tbx-2NP_001370674.1 T-box_TBX2_3-like 59..243 CDD:410314 102/185 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I2074
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.860

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