DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and mab-9

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_493750.1 Gene:mab-9 / 173441 WormBaseID:WBGene00003106 Length:346 Species:Caenorhabditis elegans


Alignment Length:377 Identity:121/377 - (32%)
Similarity:175/377 - (46%) Gaps:107/377 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LPIPMPRHVIMPPRV-------TLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVS 94
            :|...|......|::       .|| :|..|:..:||.:|..:|||||||||||||||::::|.:
 Worm    52 IPSKSPERSRGRPKIGLKMKEGNLP-IECKLEGSELWAKFFDLGTEMIITKSGRRMFPTVKVSFT 115

  Fly    95 GLEDESNYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILF 157
            .:..::.|.:.|::||:...||:  ::.|.|:.||.|||....|.|||||||.||.......|.|
 Worm   116 NVILDALYYIFLDVVPVDSKRYRYIYNKSAWLTAGKAEPVPKNRYYLHPDSPFTGDQLLKHVISF 180

  Fly   158 NKVKLTNNTLDNSGHIVLASMHKYQPRLHVIR-----TADLAQIPWAPQQ--AFVFAETEFVAVT 215
            .|.|||||.:|.:||::|.||||||||:|:::     ..|..::..:.::  .:.|.||:|:|||
 Worm   181 EKTKLTNNEVDKTGHLILNSMHKYQPRIHIVQRQKANPLDPNKVVMSEEKHCTYTFPETQFMAVT 245

  Fly   216 AYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGG 280
            ||||..||||||:.||||||||:             |||...|:       ..:|..||.     
 Worm   246 AYQNQLITKLKIEKNPFAKGFRD-------------PTGRSPDE-------MERSPGDMM----- 285

  Fly   281 GETAGGTSSIGDSDGPQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQA 345
                                                                 |.:..|...|| 
 Worm   286 -----------------------------------------------------LSNFYHSSALQ- 296

  Fly   346 RSASSVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYP--PA 395
               .::|.|...:.:|  |.||::.|....|    ..|.::.|:|..|  ||
 Worm   297 ---QAMFQQCLSKTLQ--LNPSIMMLYQNVF----PTGNSLPAAPTVPGNPA 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 91/195 (47%)
mab-9NP_493750.1 TBOX 76..272 CDD:238106 94/209 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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