DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and Eomes

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_034266.2 Gene:Eomes / 13813 MGIID:1201683 Length:707 Species:Mus musculus


Alignment Length:455 Identity:145/455 - (31%)
Similarity:209/455 - (45%) Gaps:87/455 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPG----VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGD 113
            :||    ..:.|.|..||.:||:..|||||||.||||||.:..:::||...::|.|.:|:|....
Mouse   262 VPGSGFRAHVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNINGLNPTAHYNVFVEVVLADP 326

  Fly   114 CRYKFSGSQWVPAGGAE-PQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNN---TLDNSGHIV 174
            ..::|.|.:||..|.|: .....:||:||:||.||:||..|.|.|.|:|||||   ..:|:..||
Mouse   327 NHWRFQGGKWVTCGKADNNMQGNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIV 391

  Fly   175 LASMHKYQPRLHVIRTA-----DLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAK 234
            |.|:||||||||::...     ||.: | :..|.|.|:||:|:|||||||..||:||||:|||||
Mouse   392 LQSLHKYQPRLHIVEVTEDGVEDLNE-P-SKTQTFTFSETQFIAVTAYQNTDITQLKIDHNPFAK 454

  Fly   235 GFRETGQSRC----KRKMSSSPTGEDQDQSPSLSHSQSQSESDMSP-----TKGGGETAGGTSSI 290
            |||:...|..    ..:::.|||  |..:|..:.........:..|     |........|..::
Mouse   455 GFRDNYDSMYTASENDRLTPSPT--DSPRSHQIVPGGRYGVQNFFPEPFVNTLPQARYYNGERTV 517

  Fly   291 GDSDG---PQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQARSASSVF 352
            ..::|   ||.....:|.....|.:.:..   |..:.|.:||             .::...||..
Mouse   518 PQTNGLLSPQQSEEVANPPQRWLVTPVQQ---PVTNKLDIGS-------------YESEYTSSTL 566

  Fly   353 MQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAA----------MLQAGLGPHPG 407
            :.:   .::||  |.....|..|:           ..|.:|..|          .:.||| |...
Mouse   567 LPY---GIKSL--PLQTSHALGYY-----------PDPTFPAMAGWGGRGAYQRKMAAGL-PWTS 614

  Fly   408 LNLPPGVSGADLISDESGAEEL------------ELDVGSETSTLEQSTQEQPLEQPSTRSKGFS 460
            ...|| |...|.::.|...||:            .||  |..|.:..|..::....|||.|.|.|
Mouse   615 RMSPP-VFPEDQLAKEKVKEEISSSWIETPPSIKSLD--SSDSGVYNSACKRKRLSPSTPSNGNS 676

  Fly   461  460
            Mouse   677  676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 94/199 (47%)
EomesNP_034266.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..125
TBOX 269..462 CDD:238106 93/194 (48%)
T-box_assoc 484..705 CDD:292794 44/229 (19%)
Required for transcription activation. /evidence=ECO:0000250 592..707 23/89 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 642..689 11/37 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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