DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and tbx19

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_003198807.1 Gene:tbx19 / 100538180 ZFINID:ZDB-GENE-110411-5 Length:436 Species:Danio rerio


Alignment Length:397 Identity:133/397 - (33%)
Similarity:191/397 - (48%) Gaps:67/397 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSG 120
            ::::|::.:||::|.::..|||:||:||||||.:::||:||:..:.|..||:..|....|:|:..
Zfish    49 LKVSLEDAELWRKFKEVTNEMIVTKNGRRMFPVLKVSVTGLDPNAMYSFLLDFTPADGHRWKYVN 113

  Fly   121 SQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRL 185
            .:|||||..||.|...:|:|||||..||||...|:.||||||||. |:..|.|:|.|:|||:|::
Zfish   114 GEWVPAGKPEPHSHSCVYIHPDSPNFGAHWMKAPVSFNKVKLTNK-LNGGGQIMLNSLHKYEPQI 177

  Fly   186 HVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSS 250
            |::|.....::    .....|.:|:|:|||||||:.||.|||.:|||||.|.: .:.|...|...
Zfish   178 HIVRVGGSHRM----VTNISFTDTQFIAVTAYQNEEITALKIKHNPFAKAFLD-AKERSHPKNHL 237

  Fly   251 SPTGEDQDQS-PSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDG-----------------PQ 297
            .|..|:|... |......|..:|..|.:.|.....||........|                 |.
Zfish   238 EPPVENQHMGIPHCGWFISNPDSLCSASGGNFPYPGGLPLTHHHHGYKHYPSLHGHRAAPYPSPY 302

  Fly   298 IKRLRSNG-SACSLSSSLDD--QSVPGASSLALGSPP-PHLHSHSHPHPLQARSASSVFMQHFQQ 358
            :.|....| :..|||.:|..  |...|..|....||| |.......|.| .:..|||.:      
Zfish   303 LPRHHHRGHNTVSLSDNLSPGVQMFSGHESWTGVSPPGPAAMLSMQPAP-NSPGASSQY------ 360

  Fly   359 NMQSLLRPSLVDL-ACTYFGRPHEYGGAIQ-----------ASPMYPPAAMLQAGLGPHPGLNLP 411
                   |.|..: :||....|.  ||.:.           ||....|.::|||    |      
Zfish   361 -------PCLWTVSSCTVSSSPP--GGVVSLTHGQDEPADGASTSASPCSLLQA----H------ 406

  Fly   412 PGVSGAD 418
             |.:|:|
Zfish   407 -GPTGSD 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 84/185 (45%)
tbx19XP_003198807.1 TBOX 48..230 CDD:238106 84/186 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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