DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc2 and tbx3b

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_002662050.2 Gene:tbx3b / 100334188 ZFINID:ZDB-GENE-060531-144 Length:594 Species:Danio rerio


Alignment Length:307 Identity:121/307 - (39%)
Similarity:177/307 - (57%) Gaps:31/307 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWV 124
            |:.::||.|||::||||:||||||||||:.::..||.:.::.|.:|:::|...|.||||...:|:
Zfish    76 LEGNELWGQFHKVGTEMVITKSGRRMFPAFKVRCSGFDRKARYILLMDIVASDDYRYKFHNCRWM 140

  Fly   125 PAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIR 189
            .||.|:|:.|:|||:|||||:||..|.::.:.|:|:|||||..|..|..:|.||||||||.|::|
Zfish   141 VAGKADPEMPKRMYIHPDSPSTGEQWMSKAVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVR 205

  Fly   190 TADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETG-----------QSR 243
            ..|:.::|::..:.:||.||||:|||||||::||:||||||||||||||||           ..|
Zfish   206 ANDVLKLPYSTFKTYVFPETEFIAVTAYQNEKITQLKIDNNPFAKGFRETGNGRREKRKQMLHQR 270

  Fly   244 CKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSAC 308
            |:.:...:....|......:|.:....||::..:.............||..       .||....
Zfish   271 CEVEPKKASVLTDDSSFDQISSNYLIQESNVVTSTSTDTNESDIDGFGDEK-------ESNEVES 328

  Fly   309 SLSSSLDDQSVPGASSLA----------LGSPPPHLHS---HSHPHP 342
            ..|.|.|:|:....|:..          :|...|.::|   ||...|
Zfish   329 IQSISQDEQNSREISTTVQESKDDPNEEIGDRNPEINSKKQHSVEQP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 100/192 (52%)
tbx3bXP_002662050.2 TBOX 74..256 CDD:238106 98/179 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.