DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbx3b

DIOPT Version :10

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_002662050.2 Gene:tbx3b / 100334188 ZFINID:ZDB-GENE-060531-144 Length:594 Species:Danio rerio


Alignment Length:307 Identity:121/307 - (39%)
Similarity:177/307 - (57%) Gaps:31/307 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGSQWV 124
            |:.::||.|||::||||:||||||||||:.::..||.:.::.|.:|:::|...|.||||...:|:
Zfish    76 LEGNELWGQFHKVGTEMVITKSGRRMFPAFKVRCSGFDRKARYILLMDIVASDDYRYKFHNCRWM 140

  Fly   125 PAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIR 189
            .||.|:|:.|:|||:|||||:||..|.::.:.|:|:|||||..|..|..:|.||||||||.|::|
Zfish   141 VAGKADPEMPKRMYIHPDSPSTGEQWMSKAVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVR 205

  Fly   190 TADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETG-----------QSR 243
            ..|:.::|::..:.:||.||||:|||||||::||:||||||||||||||||           ..|
Zfish   206 ANDVLKLPYSTFKTYVFPETEFIAVTAYQNEKITQLKIDNNPFAKGFRETGNGRREKRKQMLHQR 270

  Fly   244 CKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKRLRSNGSAC 308
            |:.:...:....|......:|.:....||::..:.............||..       .||....
Zfish   271 CEVEPKKASVLTDDSSFDQISSNYLIQESNVVTSTSTDTNESDIDGFGDEK-------ESNEVES 328

  Fly   309 SLSSSLDDQSVPGASSLA----------LGSPPPHLHS---HSHPHP 342
            ..|.|.|:|:....|:..          :|...|.::|   ||...|
Zfish   329 IQSISQDEQNSREISTTVQESKDDPNEEIGDRNPEINSKKQHSVEQP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 T-box_Drosocross-like 56..238 CDD:410332 96/177 (54%)
tbx3bXP_002662050.2 T-box_TBX2_3-like 70..254 CDD:410314 96/177 (54%)
rad2 <282..>410 CDD:273166 19/101 (19%)

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